Herbiconiux sp. SALV-R1: HL652_13965
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Entry
HL652_13965 CDS
T06594
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea03030
DNA replication
hea03430
Mismatch repair
hea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HL652_13965
03430 Mismatch repair
HL652_13965
03440 Homologous recombination
HL652_13965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hea03032
]
HL652_13965
03400 DNA repair and recombination proteins [BR:
hea03400
]
HL652_13965
Enzymes [BR:
hea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HL652_13965
DNA replication proteins [BR:
hea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HL652_13965
DNA repair and recombination proteins [BR:
hea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HL652_13965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
Rad17
AAA_14
DnaX_C
AAA_30
AAA_19
AAA_5
AAA_2
ORC-CDC6-like
AAA_18
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJU54622
UniProt:
A0A6M5IVW2
LinkDB
All DBs
Position
complement(2910709..2913792)
Genome browser
AA seq
1027 aa
AA seq
DB search
MVTALYRRYRPENFAEMIGQSQVTDPLMTALRTNRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTDTPCGVCPSCVELSRDGMGSLDVVEIDAASHGGVDDARDLRERAIFAPARDR
YKIFIIDEAHMVTSGGFNALLKIVEEPPEHVKFIFATTEPDKVIGTIRSRTHHYPFRLIP
PAQLLEYVQQLCDSEGVEVAPGVLPLVVRAGGGSARDTLSLLDQLIAGSEGNRVEYERAV
ALLGYTHGALLSEAIDALGTHDGAAAFDAVDRVIQTGQDPRRFVEDLLERLRDIIVVEAT
REQAPSVLRGVPADEIEVMRRQAALFGHAELSRVADIVNTALSEMTGATSPRLHLELMVA
RTLVPSVDDTQRGALARVERLERRIGVDGGGADAGPASSAAASSAVAPPSAPPAAPSSPL
SGGNAPSASPESAAGGWAVTAPGSGTAPTRSAEPTSSQAVPSSGSGDPASHAPGDAPATP
PTAPTPPAVPAASAVNTPDVVATPPSAAPLSEPVEPGTVSVQQLKDAWPEILDRVQKAKM
TAWLVVFTAQVRSLDGDVLTLAFPSENDVASFKERSAPGQGVSEYLRQAIVDVLGLRVKY
IARVDTSLRPHDAPEGGAPSASAAPTDRSPAPSAAPSAPPAVAPNAQPADQAPTPAAAAS
SQAPADLSPAPAAPTNAAAPSPAEQPAGATREAGASAATSPAQHSTPPAPASSASAPTQV
AGMTIPARRTPAPVPASEWSTPGVSDLGGSSFEEPTPPPPAAPVTPAAGTPAGPAGVDGP
QAAASPSQPPAQAGPPTHERPEPAGGPAQGSASRPESAGGPAQRPAQPSGQAGGQAQRPA
PAVDRAAEAQRPATERRPEPQRGPAPTRNASPTTSWDVVAIPSSSASDDDEPPFFDEPMP
SDEPELPADRADAMPDPYTRATPATPIRPGDAGAARDGAQPNRPGAPTTASGASASAPAS
GSERRPGALRFEPGPDTAPASAPPAPVATTASGRARYGEAVVREILGANFIEEQPLPSRD
PRPLGEG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaccgccctgtatcgccgttaccggccagagaacttcgccgagatgatcgggcag
tcccaggtgaccgatccgctcatgacggcactgcgcacgaaccgggtcaatcacgcctat
ctcttcagcggcccgcgaggctgtggcaagacgacgtcggcgcgcatcctggcccgctgc
ctcaactgtgccgaggggccgacagacacgccgtgcggggtctgcccgagctgtgtcgag
ctgagccgagacggcatgggctcgctcgacgtggtcgagatcgacgccgccagccacggt
ggtgtcgacgacgcacgcgacctgcgtgagcgggccatcttcgcgcccgcgcgcgaccgg
tacaagatcttcatcatcgacgaggcgcacatggtgacctcgggcggcttcaacgcgctg
ctcaagatcgtcgaagagccgccggagcacgtgaagttcatcttcgccacgaccgagccc
gacaaggtcatcggcaccattcggtcgcgcacgcaccactacccgttccggctcatcccg
ccggcgcagctgctcgagtacgtgcagcagctgtgcgactccgagggcgtcgaggtggca
cccggagtgctgccgctcgtcgtgcgcgctggcggcggctcggcgcgcgacaccctgtcg
ctgctcgaccagctcatcgcgggctcggagggcaaccgggtcgagtacgagcgcgccgtc
gcgctgctcgggtacacgcacggggcgctcctctccgaggccatcgacgcgctcggcacg
cacgacggggcggcggccttcgacgcggtcgaccgcgtcatccagaccggccaagacccc
cggcgcttcgtcgaagacctgctcgagcgcctgcgcgacatcatcgtcgtcgaggccacg
cgcgagcaggcgccgtcggtgctgcgcggagttccggccgacgagatcgaggtgatgcgc
cgtcaggcggccctgttcggtcacgccgagctctcgcgcgtcgccgacatcgtgaacacc
gcgctgtcggagatgacgggggcgacctcgccgcggctgcacctcgagctgatggtggcg
cgcaccctcgtgccgtcggtcgacgacacgcagcgcggcgcgctggcgcgggtggagcgg
ctcgagcggcgcatcggggtcgacgggggaggagcggatgctgggcctgcgtcgagcgcg
gcagcctcctcggctgtggcacccccatcggccccgcccgcagcgccgagctcgccgctg
tcgggcggcaacgccccgtctgcctcgcccgagagtgcggcgggtggttgggccgtcacc
gcgccgggttcgggaaccgctccgacgcgctcggccgagcccacgtcttcgcaggcggtg
ccgtcgtcgggttctggcgatcccgcgtctcacgcccccggggatgctcctgcgacccca
cccaccgcgcccactccgccggccgtcccggccgcatccgcggtcaacactcccgatgtc
gtggcgaccccaccgtcggcagccccgctctccgagcccgtcgagcccggcaccgtgtcg
gtgcagcagctgaaagatgcgtggcccgagatcctcgaccgcgtccagaaggcgaagatg
actgcctggctcgtcgtcttcaccgcccaggtgcgctccctcgacggcgacgtgctcacc
ctcgccttccccagcgagaacgacgtcgccagcttcaaggaacgctccgcccccggccag
ggcgtcagcgaatacctccgccaggcgatcgtcgacgtcctcggcctccgcgtcaagtac
atcgcccgcgtcgacacctccctccgcccccacgacgccccggagggcggcgccccgagc
gcgagcgctgctcccaccgatcggtcacccgcgccaagtgcagcgccgagcgctcctccc
gccgtggcaccgaacgcacagcccgccgatcaggcgcccacacccgctgctgctgcatcg
agccaagcgcccgcggacctctcgcctgcacccgcggcgccgacgaacgcggccgccccg
tctccggcggaacagcctgcaggcgcgacccgcgaagcgggtgcttccgcagcgacctcg
cccgcccagcactccacgccacccgcgccggcgtcgtctgcgtcggctcccacccaggtc
gcggggatgacgatccccgcgcggcgaacccccgctcccgtgcctgcgtcagagtggtcg
actcctggcgtctccgacctcggcggatcttccttcgaggaacccacccctccgcccccc
gcggctccggtgacccctgcagccgggacacctgccggcccggccggcgtcgacggcccc
caggccgcggcttccccctcacagccacctgcacaagcgggaccgccgacgcacgagcgt
cccgagccagcgggtgggcccgcccaggggtcggcctcgcgccccgagtcagcgggtggg
ccggctcagcgtccggctcagccgtcggggcaggcgggtgggcaggcgcagcggcccgct
cccgctgtcgaccgagcggccgaggctcagcgtccggccactgagcggcgacccgaaccc
cagcggggccccgcgccgacaaggaacgcatcacccaccaccagctgggatgtcgtcgcg
atcccgtcatcgtccgcatccgacgatgacgagccgccgttcttcgacgagccgatgccg
agcgacgagcccgagctgcccgccgatcgcgccgacgccatgcccgacccgtacacccgt
gcgacgccggcgacgcccatccgaccgggcgacgcaggcgcagcccgcgatggcgcacag
ccgaaccgccccggtgccccgacgaccgcatccggagcgtccgcgtccgcccccgcatcc
ggttcggagcgccgccccggcgccctccgcttcgagcccggccccgacaccgccccggcc
tccgcgccgccggcgcctgtcgccaccaccgcatccggccgcgcgcgctacggggaggcg
gtcgtccgcgagatcctcggagccaacttcatcgaggagcagcccctcccgagccgcgac
ccccgccccctcggcgagggctaa
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