Herbiconiux salviae: HL652_18445
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Entry
HL652_18445 CDS
T06594
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
hea
Herbiconiux salviae
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HL652_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hea03021
]
HL652_18445
Transcription machinery [BR:
hea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HL652_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_17
DUF3071
Motif
Other DBs
NCBI-ProteinID:
QJU55405
LinkDB
All DBs
Position
3867013..3867987
Genome browser
AA seq
324 aa
AA seq
DB search
MSRTLATAPLETDDAEPQARLADIRGASEDPVKDYLRQIGRTALLTAEDEVDLGRRIEVG
VLADAKLSETPVMDATLKRELQWLARDGQAAKRQLIQANLRLVVSIAKRYLERGLPFLDL
IQEGNIGLVRAVEKFDYQAGFKFSTYGSWWIKQSINRALADSGRIIRIPVHTSEKISSIT
RMQRRLMIELGREATIEEVAAAVDLPPRKVQELIRHGRDTVSIHTPVGDDDAELGDLIED
TSQAQPFDAAAASLQHHDLSAALATLPPREARVVCMRFGLDGEDPMSFDQIGDVLGVSRE
RARQIQRRALSMLRNEALHDYLIA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcacacttgccacggcccccctcgagaccgacgacgccgagccccaggcccgt
ctcgccgacatccgcggggcttccgaagacccggtgaaggactacctccgccagatcggt
cgcaccgctctgctgaccgccgaggacgaggtcgacctcggccgccgcatcgaggtcggc
gtgctcgccgacgcgaagctcagcgagaccccggtgatggacgcgacgctgaagcgcgaa
ctgcagtggctggcccgcgacggccaggctgcgaagcgccagctcatccaggccaatctc
cgcctggtcgtgtcgatcgcgaagcgctacctcgaacgcggactcccgttcctcgacctc
atccaggaggggaacatcggtctcgtgcgtgcggtcgagaagttcgactaccaggccggc
ttcaagttctcgacctacggctcctggtggatcaagcagtcgatcaaccgcgcgctcgcc
gacagcggccgcatcatccgcatcccggtgcacacctccgagaagatctcctcgatcacg
cgcatgcagcgccgcctcatgatcgagctcggccgtgaggccacgatcgaggaggtcgcc
gccgccgtcgacctgccgccgcgcaaggtgcaggagctcatccgtcacgggcgcgacacg
gtgtcgatccacacgccggtgggcgatgacgacgccgagctcggcgacctgatcgaagac
acctcgcaggcccagccgttcgacgccgccgccgcgtcgctgcagcaccacgacctctcg
gccgcgctcgccaccctgccgccgcgcgaggcgcgtgtggtgtgcatgcgcttcgggctc
gacggcgaagaccccatgtcgttcgaccagatcggcgacgtgctgggtgtctcgcgggag
cgtgcccgtcagatccagcgccgggcgctgagcatgctccgcaacgaggcgctgcacgac
tacctcatcgcctga
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