Herbiconiux sp. SALV-R1: HL652_20705
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Entry
HL652_20705 CDS
T06594
Name
(GenBank) DEAD/DEAH box helicase
Organism
hea
Herbiconiux sp. SALV-R1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJU55796
UniProt:
A0A6M5J579
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Position
complement(4361675..4364743)
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AA seq
1022 aa
AA seq
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MPSHAPRPDPRAGWRSVMGSLLSGADAEAGSAEKLTPMGLQFELRALEPRSHDRWRGPTS
ATAAPDDADDTGTRDATGTRATDLDPDDLADALATRPPRRLGVRPVVRSASGSYVKANIT
WGSFTHQVNRLGLDPAHHRWFAQFAALHRATRPETLPPETDWVTLDEFASPLLWELLAEA
DMLGIELVTSSRGGAVEVRTEPEATITLDARRDAEATAGSAVVLHPLVTPGVAGDPDGSP
AHNAGPLGDHGVYLYRLTKRPLIVLARLAHPLTTEERGLLGRAPLRVPPADTAQFFDEYY
PELQRGVAVTSGDASVALPEIPPPLLVLAARFRANDVLQLDWDWAGHRDPQAEQRILAEL
AIELDAVLTRFPPTVDPLSPSLTLRGVDAAAFAEKALPLLDARDDVRVDVIGTRPAYREI
EGHPEVTLTAVETLKRDWFDLGFVVNINGYVVPFGPLFKALAKGQKKLLMVDKSYLSLDH
PAFDRLRELLDEADALHEWETGPRVSRHRLATIPAFDDLTEQSPEAAAWRAAVAALRDEN
AEVPATPVPATIRAELRPYQKAGFDWLALLWRHGLGGVLADDMGLGKTLQTLALIAHARQ
EATSAAAADAAAPPFLVVAPTSVVANWAAEAARFAPGLVVRTVTATEKASRPLADLARGA
DVVVTSYALFRLDARAYGRLPWAALVLDEAQFVKNHLSKLHAAARELDVPFTLAITGTPL
ENDLLELWALFDLVAPGLFPSATRFAEKFQRPIERGISPAALDTLRRRIRPFLLRRTKDQ
VAPELPEKQEQLLEVELAPAHRHLYDTVLQRERRKLFGLIDDLDRNRFIVFRSLTLLRLL
ALDASLIDEGHTNIPSSKLDALVEHLGEVLAEGHRALVFSQFTGYLGKVAERLTTEGIRF
EYLDGSTTRRPEVIARFREGDAPVFLISLKAGGFGLTLTEADYVYLLDPWWNPASENQAI
DRTHRIGQTHPVNVYRLVASGTIEEKVMALKEHKAKLFDAVLDDDELFSRALTADDIRAL
LD
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgcacgccccacgacccgatccgcgggcggggtggcgcagcgtcatggggtcg
ctgctcagcggggcggatgcggaggccggcagcgcagagaagctcacccccatggggttg
cagttcgagctgcgggcgctcgagccgcgctcgcacgaccgctggcgcgggcccacctcc
gccacggccgcgcccgatgacgccgacgacacgggcacgagagacgccacaggcacgaga
gcgaccgacctcgaccccgacgatctcgccgacgcgctcgccacccggccacctcgccgg
ctgggcgtgcggccggtcgtgcgcagcgcatccggatcgtacgtgaaggcgaacatcacc
tggggctcgttcacgcaccaggtgaaccggctggggctcgacccggcccaccaccgctgg
ttcgcccagtttgccgcgctgcaccgggcgacccggcccgagaccctcccgcccgaaacc
gactgggtcaccctcgacgagttcgccagccccctgctctgggaactgctcgccgaggcc
gacatgctcggcattgagctcgtcacgtcgagccggggcggcgccgtcgaggtgcgcacc
gaacccgaggccacgatcacgctcgacgcgcgacgtgacgctgaggcgacggccgggtcg
gcggtggtgctgcatcccctcgtcaccccgggcgtggccggcgaccccgacggctccccc
gcccacaacgcgggtcccctcggcgaccacggcgtctacctctaccgccttaccaagcgg
ccgctcatcgtgctcgcccgtctcgcgcatccgctcaccaccgaggagcgcgggctcctc
ggccgcgcacccctgcgcgtgcctcccgccgacaccgctcagttcttcgacgagtactac
cccgagctgcagcgcggcgtcgccgtcacgagcggtgacgcgtcggtggcgctccccgag
atccccccgccgctgctcgtgctcgccgcccgcttccgcgcgaacgacgtgctgcagctc
gactgggactgggcgggccaccgcgacccgcaggccgagcagcgcatcctcgccgagctc
gcgatcgagctcgacgccgtgctcacccgcttcccgcccacggtcgacccgctgagcccc
tccctcaccctgcgcggcgtcgacgccgccgccttcgccgagaaggcgctgcccctgctc
gacgcccgcgacgacgtgcgcgtcgacgtcatcggcacgcgcccggcctaccgcgagatc
gaagggcaccccgaggtcaccctcaccgccgtcgagacactgaagcgcgactggttcgac
ctcggcttcgtggtgaacatcaacggctacgtcgtgcccttcggtccgctcttcaaggcg
ctcgccaaaggccagaagaagctgctcatggtcgacaagagctacctctcgctcgaccac
cccgccttcgaccgcctgcgcgaactgctcgacgaagcggatgcgctgcacgagtgggag
accggcccccgggtgagcaggcatcggctcgccaccatccccgccttcgacgacctgacc
gagcagagccccgaggcggcggcctggcgggcggcggtggccgcgctccgcgacgagaac
gcggaggtgccggcgacgcctgtgccggcgacgatccgggccgagctgcggccctaccag
aaggcgggcttcgactggctcgcgctgctctggcgccacgggctcggcggcgtgctggcc
gacgacatggggctcggcaagacgctgcagaccctcgcgctcatcgcccacgcgcggcag
gaggccacctccgcggccgccgccgacgcggccgccccgcccttcctcgtggtcgccccc
acctccgtcgtggcgaactgggcagccgaggccgcccgcttcgcccccggactcgtcgtg
cgcacggtcaccgccaccgagaaggcatcccgccccctcgccgacctcgcccgcggagcc
gacgtcgtggtcacgagctacgccctcttccgcctcgacgctcgcgcctacggccgcctg
ccctgggcggcgctggtgctcgacgaggcgcagttcgtgaagaaccacctctcgaaactg
cacgccgcagcccgcgagctcgacgtgccgttcaccttggccatcacgggcaccccgctc
gagaacgacctcctcgagctctgggcactgttcgacctcgtcgccccgggcctcttcccc
tccgccacccggttcgccgagaagttccagcgccccatcgagcgcggcatctccccggcc
gccctcgacacgctgcggcgccgcatccgccccttcctgctccgccgcaccaaagaccag
gtcgcccccgagctgcccgagaagcaggagcagctgctcgaggtcgagctcgcgcccgcc
caccgccacctctacgacactgtgctgcagcgcgagcgccgcaagctgttcggcctcatc
gacgacctcgaccgcaaccgcttcatcgtgttccgctcgctcaccctgctgcgcttgctc
gccctcgacgcgagcctcatcgacgagggccacacgaacatcccgtcctcgaagctcgac
gcgctcgtcgagcacctcggcgaagtgctcgccgagggtcaccgcgccctggtgttcagc
cagttcaccggctacctcggcaaggtcgccgagaggctgacgacggagggcatccgcttc
gagtacctcgacggctccaccacgaggcgcccggaggtgatcgcgcggttccgcgagggc
gacgcgcccgtcttcctcatcagcctcaaggccggcggcttcgggctcaccctcaccgag
gccgactacgtctaccttctcgacccgtggtggaacccggcgagcgagaaccaggcgatc
gaccgcacccaccgcatcggccagacccacccggtgaacgtctaccgtctggtcgcctcg
ggcaccatcgaggagaaggtgatggcactcaaggagcacaaggcgaagctcttcgacgcc
gtgctcgacgacgacgagctcttctcccgcgccctcacggccgacgacatccgcgccctc
ctcgactga
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