Helicobacter pylori BM012A: U063_0261
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Entry
U063_0261 CDS
T02939
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
heb
Helicobacter pylori BM012A
Pathway
heb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
heb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U063_0261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heb03400
]
U063_0261
Enzymes [BR:
heb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
U063_0261
DNA repair and recombination proteins [BR:
heb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U063_0261
Prokaryotic type
U063_0261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHA87626
LinkDB
All DBs
Position
258235..258936
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AA seq
233 aa
AA seq
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MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKGPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLKKEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPMPC
CGDLSAWAKRGVLLLNAILSVEKNQAASHKYIGWEAFSDRILERLFETISPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQNAYREVYRKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttaagcttggcttggcgggaatttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaagccctaaaaggccct
aaaaccattttccctaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcatccttttagggcaagatccctaccattccacctacctaaaaaaggag
caagaattgccggtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttgggcgtgcctatgccttgt
tgtggggatttgagtgcgtgggctaaaaggggtgtgctgttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaatatattggctgggaagcttttagcgacagg
atattagaacgcctttttgaaacgatttcccctttaatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgcgctaatccccaaaaacaaacacatcatcatcacagcccctcac
cctagccccttatctagaggttttttagggagtggggtttttacaagcgttcaaaacgct
tatagagaggtttatcgcaaggattttgattttagtttatga
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