Helicobacter pylori BM012A: U063_1025
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Entry
U063_1025 CDS
T02939
Name
(GenBank) Outer membrane protein HopO
KO
K15848
outer membrane protein SabA
Organism
heb
Helicobacter pylori BM012A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
SabA_adhesion
DUF6026
PHM7_cyt
Motif
Other DBs
NCBI-ProteinID:
AHA88371
LinkDB
All DBs
Position
1049855..1051765
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AA seq
636 aa
AA seq
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MKKQFLLSLSLASSLLHAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLSQSLAQ
LASLKKSIQTANNIQAVNNALSDLKSFASNNHTNKETSPIYNTVQAVITSVLAFWSLYAG
NTTSFHVTGLNDGSNAPLGRIHKDGNCTGLQNCFMKKETYDKMKELAENLQKAQGNLCAL
SECSSDQSNGNKTSMTTALQTAQKLMDLIEQTKVSMVWKNIIIAGVSNKAGGAGAITSTG
PVTDYAVFNNIKAMLPILQQALKLTQSNHTLSTNLQDRAMGSQTNREFAKDIYALAQNQK
QILSNASSIFNLFNSIPKDQLKYLEKAYLKVPHLGKTPTNPYRQEVNLNKEINAVQNNVA
DYGNRIDSALSVARDVYNLKSNQTEIVTAYNNAKNLSEEISKLPYNKVNVTNIVMSPKNP
TSDQYQINPEQQSNLNQALAAMSNNPFKKVGMISSQNNNGAMNGLGVQVGYKQFFGESKR
WGLRYYGFFDYNHGYIKSSFFNSSSDVWTYGGGSDLLVNIINDSITRKNNKLSVGLFGGI
QLAGTTWLNSQYVNLTAFNNPYSAKVNASNFQFLFNLGLRTNLATAKKKDSEHSAQHGIE
LGIKIPTINTNYYSFLGTQLQYRRLYSVYLNYVFAY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaatttttactctctctctctctcgcttcatcgcttttgcacgctgaagac
aacggcttttttgtgagcgctggctatcaaatcggcgaagcggtgcaaatggtgaaaaac
accggcgaattgaaaaacttgaacgacaaatatgagcaattaagccaatctttagcccaa
ctggcttcgttaaaaaaaagcattcaaacggcgaacaacattcaggctgtcaacaatgct
ttaagcgatttaaaaagctttgcgagtaacaaccacacaaacaaagaaacatcgcccatc
tacaacaccgtgcaagctgttatcacttcagtattggctttttggagtctttatgcaggg
aacactaccagttttcatgtgaccggtttgaatgatggatctaatgctcctcttggaaga
atccataaagacgggaactgcacaggattacaaaactgttttatgaaaaaagaaacttat
gataaaatgaaagagcttgccgaaaacctccaaaaagctcaaggcaatctctgtgcctta
tcagaatgctctagcgatcaatcaaatggaaacaaaacttccatgactacagctcttcaa
accgcgcaaaagctcatggatttaatcgaacagaccaaggtttctatggtgtggaaaaat
ataatcatcgcaggtgtttcaaacaaagccggtggtgctggcgctatcacatccactggt
cctgtaaccgactatgcggtgtttaacaacattaaggcgatgctacctatcttgcaacaa
gcgctcaaactaactcagagcaaccacaccctatccactaacttgcaagatcgagctatg
ggatctcaaacaaatcgtgaatttgctaaagacatttacgctttagctcaaaaccaaaag
caaatcctttctaacgcttcaagtatcttcaatctctttaattccattcctaaagaccaa
cttaagtatttggagaaagcctacttgaaagtgccacatttgggtaaaacccctactaac
ccctacagacaggaggtgaatttgaataaagaaattaatgcagttcaaaacaatgtagct
gattatggcaatcggattgattcggctttaagcgtggctagagatgtttataacctaaaa
tccaatcaaacagaaatcgtaaccgcctataacaacgctaagaatttgagcgaagagatt
tctaaactcccctataataaggtcaatgtaacaaacattgttatgtcgcctaaaaatcct
acatcggatcaataccaaatcaacccagagcagcaatccaatcttaatcaagctttagcg
gcgatgagcaataacccctttaaaaaagtgggcatgatcagctctcaaaacaataacggc
gcaatgaatgggcttggcgtgcaagtgggctataagcaattctttggcgaaagcaaaaga
tgggggttaaggtattatggcttctttgattacaaccacggctatatcaaatccagcttt
tttaattcgtcttctgatgtatggacttatggcggtgggagcgatttgttagtgaatatt
atcaacgatagcatcacaagaaagaacaacaagctctccgtgggtctttttggaggcatc
caactagcagggactacatggcttaattctcaatacgtgaatttaacagcgttcaataat
ccttatagcgcgaaagtcaatgcttccaatttccaatttttgttcaatttgggtttgaga
accaatctcgctacagctaagaaaaaagacagcgaacattccgcgcaacatggcattgaa
ctaggcattaaaatccctaccattaacacgaattactattcttttctaggcactcaattg
caatacagaaggctctatagcgtgtatctcaattatgtgttcgcttactga
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