Helicobacter pylori BM012A: U063_1379
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Entry
U063_1379 CDS
T02939
Name
(GenBank) Helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
heb
Helicobacter pylori BM012A
Pathway
heb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U063_1379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heb03400
]
U063_1379
Enzymes [BR:
heb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U063_1379
DNA repair and recombination proteins [BR:
heb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U063_1379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
AAA_22
ADDB_N
nSTAND3
PhoH
AAA_7
AAA_30
nSTAND_NTPase5
RecA_N
GpA_ATPase
SLFN-g3_helicase
CobU
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AHA88712
LinkDB
All DBs
Position
complement(1405505..1407364)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKERHKKGALVNIHLRNKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIELALFIAQYYSANLSSVLNLFTPFKECDLVGLEKIEPVLNILSQTQTNALK
ELQKHPASLLFGDTGSGKTEIYMHAIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQNQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIVVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALQQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSNFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPIDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagagcggcataaaaaaggagcgttagtcaatatccatttaaggaataaaacgcttttg
ggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagagttagaaaaaacc
ccttattttttactcccctttcaaatagagctcgctctatttatcgctcaatattactcg
gctaatctttcttcagtcttaaatctttttaccccttttaaagaatgcgatttagtgggg
ttagaaaaaattgagcctgttcttaatatattaagccaaacgcaaaccaacgctttaaaa
gaattgcaaaaacatccagcaagcttgctttttggcgatacgggtagcgggaaaaccgag
atttatatgcatgcaatcgctcaaactttagagcaaaaaaaaagcgctttattgttagtg
ccagaaatcgccctcacccctcaaatgcagcaacgccttaaaagggtctttaaagaaaat
ttaggcttgtggcatagcaaactctctcaaaatcaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttgcctcttaag
gagttgggtttgattgttgtagatgaagagcatgacttttcttataaatcccatcaaagc
cctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
atcttaggctctgctacgccaagtttgaatagttacaaacgctttaaagataaggcttta
gtgcgcctaaaggggcgctacacccctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagcgctgcaacaagtgatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaactttgctgtgccaaaattgttac
aaaagcgttcaatgccctttttgcagcgtgaatatgagtttgcatttaaagaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagcgcgtgtcaa
agcgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgaattagaaggc
cttttgaaaggcgctaaaatagcgattttggataaagatcacactagcacgccaaaaaaa
ctccacaacattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatctaatagttacagggctttagaagaaggcgtgtcgttactttatcaa
atcgccggaaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacc
gatctgttagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagaattcaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctaatttcaaagcacccattgaaaaaatcgcctcttcttaccgc
taccttattttattgcgttccaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccctaatatcccttgcagcgtgaatatggatcctatagatattttttaa
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