Helicobacter pylori BM012A: U063_1482
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Entry
U063_1482 CDS
T02939
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
heb
Helicobacter pylori BM012A
Pathway
heb03030
DNA replication
heb03430
Mismatch repair
heb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U063_1482
03430 Mismatch repair
U063_1482
03440 Homologous recombination
U063_1482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heb03032
]
U063_1482
03400 DNA repair and recombination proteins [BR:
heb03400
]
U063_1482
Enzymes [BR:
heb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U063_1482
DNA replication proteins [BR:
heb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U063_1482
DNA repair and recombination proteins [BR:
heb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U063_1482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHA88811
LinkDB
All DBs
Position
complement(1504018..1507653)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSVTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMFLSSMAYLEGFYYFPR
INKKLLKEHSKGIIASSACLQGEVNYHLNTNNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAQNEGLNFEDDASYFAHKAREGLKERLVLVPKEKHDQYQERLEKEIEVITNMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKISVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPIAYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKGELEKKIVFGLGAIKGVGGEPIKNIIEERAKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGGNSLFG
AMECGTKEQVILDMIDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLSALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPEKQKEEVREIPPIEILA
SSSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKGLEWRDLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaataaagccttcacgcatttgcacttgcacacagaatattcgcttttagac
ggggcgaacaagattaaaattctagccaaacgcatcaaagaattgggcatgaaaagcgtg
agcgtaactgatcatgggaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcattaagcctatcatcggcatggaagcgtatatccataatgatgacaatctttct
agcaaagaaaccaagcagcgtttccatttgtgcctgttcgctaaaaaccaagagggctat
gaaaatttgatgtttttaagctctatggcgtatttagaggggttttattatttcccgcgc
atcaataaaaaacttctaaaagagcattctaaaggcattatcgcttctagtgcatgcttg
caaggggaagtcaattaccatttaaataccaataatgagagaaaccgcaagtatggggct
aaaggctatgatgaagccaaaaaaatcgcttgcgaataccaagagatttttgaagacgac
ttttatttagagatcatgcgccatggcattttagatcagcgattcattgatgagcaagtc
attaaaatgtctttagaaacggggttaaaaatcatcgccaccaacgacacccactacacc
atgcctaatgacgctaaggctcaagaagtagcgatgtgcgtagcgatgggtaaaacccta
aacgataaggggcgcttgaaacactccgtgcatgagttttacatcaagtcccctgaagaa
atggcaaagctctttgcagatattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccccccaacccccccaagt
ttcaaattcaccaaagcttacgctcaaaatgaggggctgaattttgaagatgacgcttct
tattttgctcataaggccagagagggcttgaaagagcgcttagttttagtgccaaaagaa
aagcatgatcaataccaagaacgcttagaaaaagaaattgaagtcattacgaacatgaaa
ttcccggggtatatgctgattgtgtgggattttatccgttacgctaaagaaatgggtatt
cctgtggggcctggtagggggagcgcggccgggagtttggtggcttttgctttaaaaatc
accgatattgaccccttaaaatacgatttgctctttgaaaggtttttaaaccctgaaaga
gtcagcatgcctgatattgatacggatttttgccagcgccggcgtaaggaaatcatagaa
tacatgattgaaaaatacggcaaatacaatgtggcacaagtcatcacctttaataaaatg
ttggctaagggcgtgatcagagatgtcgcaagggttttggacatgccttataaagaagcg
gacgattttgccaagctcatccctaaccgcttaggcatcacgcttaagggctatgaaaaa
aatggcgagttcatagagggggcgtgggaattagagcctaaaatcaaggaattagtggag
agtaatgaattagccaaacaagtgtgggagtattcgctcaatttagagaatttgaatcgc
aacgcaggcgtgcatgccgcagccttagtggtggatagccaaaaagaattgtggcacaaa
acccctttgtttgcctctgaaaaaaccggcggtatcgttacgcaatattccatgaagtat
ttggagccggtggatttgatcaagtttgacttcttggggcttaaaaccttgaccgtgatt
gatgatgcgcttaaaatcattaaaacgcagcataaaattagcgtggattttttatcgttg
gatatggacgatccgaaagtgtataaaacgattcaaagcggggatacggtggggatcttc
cagattgaatccggaatgtttcaagggcttaacaagcgcttaaggccttcaagctttgaa
gacattatcgctattatcgcgctagggagaccgggacctatggaatcaggcatggtagat
gattttgtcaatagaaagcatggcattgagcctatcgcttatgcgtttaaagaattagag
ccgattttaaagcccacttacggcacgatcgtctatcaagagcaggtgatgcaaatcgtg
caaactattggcggttttagtctgggcgaagcggatctcatccgccgtgctatggggaaa
aaagacgctcagatcatggcggacaataaggctaagtttgtagaaggcgctaaaaattta
gggcatgatggccaaaaggcggctaatttgtgggatttgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcggccgcttatgcgatgatcactttccaaacggcgtattta
aagacttattacaagcatgagttcatggcagcgatgctcactagcgaatccaataagatt
gaatccgtggcgcgctatattgatgaggtcagggctttagaaattgaagtgatgcccccg
cacatcaattcttccatgcaagatttcagcgtggcggagtttaaaaaccaaaagggcgag
ctagaaaagaaaatcgtgtttggtttaggagcgattaaaggggttgggggtgagccgatt
aaaaatatcattgaagaaagggctaaaggggattataagagtttagaagattttatttca
cgggtggatttttctaaactcactaaaaaatctttagagccattagtgaaatcagggagc
ttggacaatttaggctacacccgaaaaaccatgctcgctaacttggatctgatctgtgat
gcggggcgcgctaaagacaaggctaatgaaatgatgcaagggggtaactccctttttggg
gcgatggaatgcggaaccaaagagcaggttattttagacatgattgatttgggcgaacat
gacgctaaaacgcttttagaatgcgaatacgagactttaggcatccatgtttcaggcaac
cctttagacgagtttaaagaagaaattaagggctttaaaaatttagtcaaaagcattgac
attgaagagttagaaatcggctcgcaggcttatttgttgggcaaaatcatggaggttaaa
aagaaaattggcaaacgaagcggtaagccttatggcacagcggacattttggacagatac
ggcaagtttgaactcatgctgtttgaaaagcaattgagcgctttagaagagctggatatt
aataagcctttagtgtttaagtgcaagattgaagagcaagaagaagtggcgcgattaagg
ctttttgaaatcttggatttagagagcgctagggaggttaaaatccctaaagcccgctat
aaagaccctgaaaagcaaaaagaagaggtgcgcgaaatccctcccattgaaatactcgcc
tctagctcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaaga
caaatcaaagagagcgctttaaaacaccagggcaaacgccccttgtatttgatcatcaaa
gataaggataagcaattcaaaatccaaagcgatttaatggtaaatgaaaagattaaggac
gattttaaagggttagagtggagggatttagcttga
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integrated database retrieval system
