Helicobacter pylori BM012A: U063_1500
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Entry
U063_1500 CDS
T02939
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
heb
Helicobacter pylori BM012A
Pathway
heb03420
Nucleotide excision repair
heb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
heb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U063_1500
03430 Mismatch repair
U063_1500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heb03400
]
U063_1500
Enzymes [BR:
heb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U063_1500
DNA repair and recombination proteins [BR:
heb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U063_1500
MMR (mismatch excision repair)
Other MMR factors
U063_1500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AHA88829
LinkDB
All DBs
Position
complement(1524054..1526102)
Genome browser
AA seq
682 aa
AA seq
DB search
MMDFEKSILDHLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTL
TLTFTNKASKEMQERALKLLKSQAFIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSD
EVKTLCKQLKISNFRANISQIKNGMMDLSMQDSECYKAYELYQNALKKDNLVDFDDLLCL
SLKILQDNEKLAKEISERYHYIMVDEYQDTNALQLEFLKQLSCTHHNLCVVGDDDQSIYG
FRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSH
KSVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYR
LIGAVSFYERAEIKDALAFMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEDL
NLEEALKLGVFKDKLNPKNEHALKKFMAMIGRLREAFEISVEKFCERFLEETNLLKSYEK
EDNYEEREGFVKELLTLLKEHFKTNPTHSLLDFLNESVLDVHNTENAQKVSCMSVHMSKG
LEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKI
SCSPSVFLEEAKLLNQDKLLKQDHQKDVPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKI
NCGGNVYDKISEKFVEKVDNGF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgaaaaaagcattttagaccatttgaacggagcgcaaaaaatcgctgca
agccacattcaagggccattgctgattttagcgggagctgggagcggcaagactaagact
ttaacgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacacttta
acgctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttg
aaaagccaagcctttatcccccccttgctttgcactttccatcgttttggtttgctgttt
ttaaggcaacacatgaatcttttaaaaagagcgtgcgatttttcggtgttagatagcgat
gaagtcaaaacgctgtgcaaacagctcaaaatttcaaactttagagccaatatttctcaa
atcaaaaacggcatgatggatttaagcatgcaagatagcgaatgctataaagcgtatgag
ctttaccaaaacgcgctcaaaaaagacaatttagtggattttgacgacttgctttgttta
agccttaagattttacaagataatgaaaaactcgccaaagagattagcgaacgctaccat
tacatcatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaacaa
ttgagttgcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggt
tttaggggggctgatatttctaatattttaaatttttccaagcattttaaaggggctaaa
atagtgaaattagagaccaactaccgctccagtgctgaaattttagcgtgcgctaattcc
cttatcagccataaccaacaccgccacattaaaacgcttcaaagtttcaaaggctcgcat
aaaagcgtggtttgtaaagaatatttgacacaaaaagaagagagtttggatgtggcttat
caaatcaaagcccttttaaagaagggcgagaatttagaaaatatcgctattttgtaccgc
ttaaacgggcttagccgcagcattgaagagagtttgaacgctttgaatatcccctatagg
ctcattggggcggtgagtttctatgaaagagccgagattaaagacgctttggcgttcatg
catgtagtggcgaaaaaagacgatcgcttttttattaagcgcgttttaaacaaaccccca
agaggccttggcaagatcactcaagaatggattttttctcttttggatgaagaggatttg
aatttagaagaagcgctaaaacttggggtgtttaaagacaaactcaaccctaaaaacgaa
cacgctttaaagaaattcatggccatgatagggcgtttgagggaggcttttgaaatttca
gtggagaagttttgcgagcggtttttagaagagactaaccttttaaaaagctatgaaaaa
gaagacaattacgaagaaagagagggctttgttaaagagcttttaaccttattgaaagag
cattttaaaactaaccccacacattctttactggattttttgaatgaaagcgttctggat
gttcataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaaggga
ttagagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggga
ttcaatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagg
gctaaagaaggattgcagctctcttatgttcaagagcgttcgtattttgggaggaaaatc
tcttgctcgccctctgtgtttttagaagaagccaagttgctcaatcaagacaaactcctt
aaacaggatcatcaaaaagacgtgcccattaaagtgggggacttgattaggcataagatt
tttggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatc
aattgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataac
gggttttga
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