Helicobacter pylori BM012A: U063_1536
Help
Entry
U063_1536 CDS
T02939
Name
(GenBank) putative type IIS restriction/modification enzyme
Organism
heb
Helicobacter pylori BM012A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Eco57I
MmeI_Mtase
TaqI_C
BORCS6
Stonustoxin_helical
Lipoprotein_3
Motif
Other DBs
NCBI-ProteinID:
AHA88865
LinkDB
All DBs
Position
complement(1565130..1568909)
Genome browser
AA seq
1259 aa
AA seq
DB search
MIRFAHISLKDFIKKHNPQEPKKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLKNT
YNHDCNTNKKVDSAIYVDKEVRVLIEVKALNNRNEFPKDRENPLSKAFCQMVLYFLEEIE
KEKNNSLKHTIICNAHEFFLFDCKDLLFLKYDDCIKKLYKYYAKKEGTDSSKPKFYKDLE
QYLREDFHGELRYTHFNLSDGFKELPLIYQVLSHEVLLKQRKILDANTLNKDFYEELLYI
LGLEEQNDKGKILIKPSRTKNSLSDALKGSYNNLDDEEVMALLIAWNNRILFLRLLESLL
ISFKHFENENHFLTTENFENFNALNTLFFEVLAKKNDERLKEIKEDKILEKIPYLNSSLF
DKTPLELKGHEIKLLDNKKLEIYKNSVLKKDEKYQKEKALPLLEYFFAFLRLYKFTTTPK
DIKDNTDTSESRLINPSVLGLVFEKLNGYKEGSFYTPSFITSYMCKESITPIVLDKFNAI
YQWDCKDLEALKGKIDRNFSNEKAKEYLQLLLTLRVCDPAVGSGHFLVSALNEMVWIAYW
LGLIASLYACDLKLENDEIIIHTPDNKIFNYTIPHRENDPHHHIQKELFELKKSIIENCL
FGVDINPNSCEITKLRLWIELLKYSYYIFEKGKNTNALETLPNIDINIKCANSLISRFNL
NDDLKKIPNIKQKIQEYKDLVAQYKDPNSLYPLNKQDLINKIQDLKNTFSLTLKDPKTKA
ELEKAIEKHIKKYNFFALDDKSLLDGLDYFTPSLFGTPKLSPKEEEEAFASYGRIRALRK
KLDDALSGGEYQNAFEWRFEFPEVLDDEGDFSGFDCIIGNPPYIRQEQIKDLKPLLEKQY
QDFYNSTADIYTYFFALSYHLLKEKGFSAFITSNKYARAKYGAKLREWLLKKTTIVSYME
LNALKVFESAAVDTSIMNFIKQTPSKESDFKYYEPTPDDKDDLKSTPFLPMKQNALSTES
FIFANATLLDLRDKIESVGTPLKDWDIQINYGIKTGANEAFIIPTEKRDEILKNCDDVQK
DEKGMSERERTIELIKPILRGKDIKRYSYEWAHLWVIATFPSLKLDIDDYPSLKTYLSQF
RPRIDQSGEKDCRKKTNNQWFETQDTIAYHEDFEKEKIVYGEIVQEPRFYLDNGECELGY
FYAEATSFILTGEHLRYLLGMLHSKLITFAFKTFYAGGGLGESGYRYKKAFIERLPIPKI
TEKNQELADKITDGAKQILALKEKDPKANTQKLEKEIDALVYQLYHLTDEEIKIIENGQ
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtttcgctcacatctcgctcaaggattttattaaaaaacacaatccccaagaa
cccaaaaaggaaactatagaaaattttgaaaaagaaataaacagcttattagaaaacgca
ccaagacaagatgatgaagaatttcaaaaaaatgaaattaataagtttttaaaaaatacc
tataaccatgactgcaataccaataaaaaagtggatagcgcgatctatgtggataaagaa
gttcgggtgcttattgaagtcaaagccctaaacaataggaacgaattccccaaagacaga
gaaaacccgctcagtaaagccttttgtcaaatggttttgtattttttagaagaaatagaa
aaagaaaaaaacaattccctaaaacacaccattatttgcaacgcgcatgaatttttcctc
tttgattgtaaggatttactctttttaaaatacgatgattgcatcaaaaaattgtataaa
tattacgctaaaaaagaaggcacagactcttcaaaaccaaaattttacaaagatttagaa
caatatttgcgagaagattttcatggcgaactccgctacactcactttaatttgagcgat
ggttttaaagaactccctttgatttatcaggttttaagccacgaagtccttttaaaacaa
aggaaaatccttgacgctaacacgcttaacaaagatttttatgaagaattgctctatatt
ttagggttagaagagcaaaatgataaagggaaaattttaatcaagcccagccgcaccaaa
aactccctaagcgatgctttaaaaggttcatacaataatttagacgatgaagaagtcatg
gcgttactcatcgcttggaataaccgcatcttgtttttacggcttttagaaagcctttta
atctcgttcaagcattttgaaaatgaaaatcatttcttaaccacagaaaactttgaaaat
ttcaacgccctaaacaccctcttttttgaagtcctagccaagaaaaatgacgagcgttta
aaagaaattaaagaagacaagattttagaaaaaatcccttatttgaattccagtttgttt
gataaaacgcctttagaattaaaggggcatgaaatcaagcttttagacaataaaaagcta
gaaatctataaaaattccgttctcaaaaaagatgaaaaataccaaaaagaaaaagctttg
cccttgctagaatacttttttgcatttttgcgtctttataaattcaccaccacccctaaa
gacattaaagataataccgataccagcgaaagccgtttgattaaccctagcgttttaggg
cttgtttttgaaaaactcaacggctataaagaggggagcttttataccccaagctttatt
acaagctacatgtgcaaagagagtatcacgcccatcgtgttggataaattcaacgccatt
tatcagtgggactgcaaagatttagaagcgttgaaaggaaaaatagacagaaatttttca
aatgaaaaagctaaagaatacttgcaactccttctcactttacgcgtttgcgatccggcg
gtggggagcgggcatttcttggtttcagcgctcaatgaaatggtgtggattgcttattgg
ctagggcttattgcttccttatacgcttgcgatcttaaattagaaaacgatgaaatcatc
attcacacgccagataataaaatctttaattacaccataccgcatagagaaaacgacccc
caccaccacatccaaaaagaactttttgagcttaaaaaatccatcattgaaaactgcctt
tttggcgtggatattaaccccaattcatgcgaaatcaccaagctcaggctatggatagag
cttttaaaatacagctattatatttttgaaaagggtaagaacactaacgcgcttgaaacc
ctccccaacattgatattaacattaagtgcgctaattcgcttatctcacgctttaatttg
aatgacgatctcaaaaagatccccaatatcaagcaaaaaatccaagaatacaaagatcta
gtcgcccaatacaaagacccaaactctctctatcccttaaataagcaagatcttatcaac
aaaatccaagacttaaaaaacactttttccctcacgctcaaagaccctaaaaccaaagca
gagcttgaaaaggctattgaaaaacacatcaaaaaatacaatttctttgccctagacgat
aagagtttgctagatgggttagattactttaccccaagcctttttggcacgccaaaatta
agccccaaagaagaggaagaggcttttgcttcttatgggcgtattagagctttaagaaaa
aagcttgatgatgccttaagtggtggagagtatcaaaatgcgtttgaatggcgctttgaa
ttccctgaagtgttggacgatgagggggatttttcaggctttgattgcatcattggcaac
ccgccttatatccgccaagaacaaatcaaagacttaaagcctttattagaaaagcaatac
caagatttctataacagcaccgctgacatttacacctacttttttgccctatcttaccac
cttttaaaagaaaaggggtttagcgctttcatcacttctaacaaatacgcgcgcgccaaa
tacggcgctaaattgagagaatggctgctcaaaaaaaccaccattgtcagctacatggaa
ctaaacgccttaaaagtctttgaaagtgctgcagtggataccagtatcatgaatttcatc
aaacaaacgccctctaaagaaagcgactttaaatattacgaacccaccccagacgataaa
gacgatttgaaaagcaccccctttctccccatgaaacaaaacgcgctttcaacagaaagc
tttatttttgccaacgccacgcttttagatttgagggacaaaatagagagtgttggcacc
ccgcttaaagattgggacattcaaatcaattatgggataaaaaccggtgcgaacgaagcc
tttatcattcccactgaaaaaagagacgagatcttaaaaaactgcgacgatgtgcaaaaa
gacgaaaagggaatgagcgaaagagaaagaacaattgagcttattaagcctattttaaga
gggaaagacattaaaaggtattcttatgagtgggcgcatttgtgggttatagcgacattc
ccgagccttaagcttgatattgatgattatccctctcttaaaacctatctctcacaattt
cgccctagaattgaccaaagcggtgaaaaagattgtaggaaaaagaccaataatcagtgg
tttgaaacgcaagatactatcgcctatcatgaagattttgaaaaagagaaaattgtgtat
ggcgagatcgtgcaagagccacgattttatttagataatggagaatgcgaattagggtat
ttttatgcagaagctacgagcttcattctcacaggagaacatttgcgctatcttttagga
atgttgcattctaaattgatcacttttgctttcaaaactttctatgctggcggaggacta
ggcgagagtggttatcgctataaaaaggcttttatagaacggctacccattcctaaaatc
accgaaaaaaaccaagaattagccgataaaatcaccgatggcgcgaagcaaatcctagcg
ctaaaagaaaaagaccctaaagccaacactcaaaagttagaaaaagaaattgacgcttta
gtctatcagctctaccacctcaccgatgaagaaattaaaattattgaaaacgggcagtga
DBGET
integrated database retrieval system
