Helicobacter pylori BM012A: U063_1543
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Entry
U063_1543 CDS
T02939
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
heb
Helicobacter pylori BM012A
Pathway
heb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
heb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U063_1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heb03400
]
U063_1543
Enzymes [BR:
heb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
U063_1543
DNA repair and recombination proteins [BR:
heb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U063_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
AHA88872
LinkDB
All DBs
Position
complement(1576856..1577608)
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AA seq
250 aa
AA seq
DB search
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFNGYFDFWNCAIKK
GYSGVVTFTKKEPLSVSYGINIEEHDKEGRMVTCEFESFYLVNVYTPNSQQALSRLSYRM
SWEVEFRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNA
GFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGS
DHCPVGLELV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttcatggaatgtgaacgggttaagggcttgcatgactaagggctttatg
gattttttcaatagcgttgatgcggatgttttttgcattcaagaatctaaaatgcagcaa
gaacaaaacacctttgaatttaatgggtattttgatttttggaattgcgcgattaaaaag
ggctattctggggtggtaactttcactaaaaaagagcctttaagcgtgagctatggtatt
aatattgaagaacatgacaaagaggggcgcatggtaacttgcgaatttgagtcgttttat
ttagtgaatgtttatactcctaattcccaacaagccctatctaggcttagttaccgcatg
agttgggaagtggaatttaggaaatttttaaaagctttagagttaaaaaaaccggtcatt
gtgtgcggggatttaaatgtggctcacaatgaaattgatttagaaaaccccaaaacaaac
cgaaaaaatgcgggttttagcgatgaagagagagggaaattcagcgagcttttgaacgct
ggttttattgacactttccgttatttttaccctaacaaagaaaaggcttacacctggtgg
agctacatgcaacaagcaagggataaaaacattggttggcgcattgattattttttatgc
tctaaccctttaaaaacgcgcttaaaagacgctttaatctataaagatattttagggagc
gatcattgcccagtggggttggaattagtctaa
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