Halarcobacter ebronensis: AEBR_0157
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Entry
AEBR_0157 CDS
T06616
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEBR_0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hebr03019
]
AEBR_0157
03009 Ribosome biogenesis [BR:
hebr03009
]
AEBR_0157
Enzymes [BR:
hebr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AEBR_0157
Messenger RNA biogenesis [BR:
hebr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AEBR_0157
Ribosome biogenesis [BR:
hebr03009
]
Prokaryotic type
rRNA helicases
AEBR_0157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKF80675
LinkDB
All DBs
Position
145862..147298
Genome browser
AA seq
478 aa
AA seq
DB search
MTFKDFDFKEKLQKSIFDAGFKEPSPIQRDAIPVILSGKDIVGQAHTGTGKTAAFGLPLI
NMLDGNGSVEAVVIVPTRELAMQVSDELFRFAKNLSINTATVYGGQSYSRQLKHIDNAGI
IVATPGRFLDLLRDEKIKIAPKFVVLDEADEMLDMGFLDDIKEIFTFMPKERQTLLFSAT
MPSAIKALAKSILIEPEFITITQSEITNSKITQTFYVVEEHERDDALIRLYDFKNPEKSI
IFCRTKKEVDRLSTFLVSQGFSAKGLHGDMEQRQREEVINSFKKGKLEILIATDVAARGL
DVNDVSHVFNYHLPFDSESYVHRIGRTGRAGKDGMAVSIVTPHEFRMIKKIQSDTGGKLE
AKVIPNISSVKEKKTNSLKSKICEQKVYDSGVNLVESLSEEYDLETIAHKLASLLTNDTY
VKGNNNIGKSQNDIEKLLKRSREDNGKANRRGSGNFRDRNNNNRRRNPSGNRRQSRRG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaaagatttcgactttaaagaaaagttacaaaaatcgattttcgatgccggt
tttaaagaaccaagccctattcaaagagatgcaattccagttatcttatcgggaaaagat
atcgttggacaagctcacactggtacagggaaaactgctgcttttggattaccacttatt
aatatgttggatggaaatggaagtgtagaggcagttgtaatagttccaacaagagaactt
gcgatgcaagtatcagatgagctatttagatttgcaaaaaacctttcaatcaatactgct
actgtttatggtgggcaatcttactcaagacagttaaaacacattgataatgcaggtatt
atagttgcaactcctggaagatttttagatctactaagagatgaaaaaattaagattgca
ccaaaatttgttgtattagatgaagcagatgagatgcttgatatgggattcttagatgat
ataaaagagatatttacttttatgccaaaagagagacaaacacttctcttctctgcgaca
atgccaagtgcaatcaaagctttggcaaaatcaattctaatagaacctgaatttattaca
ataactcaatctgaaattacaaactctaagattacacaaactttttatgttgtagaagag
catgagagagatgatgctttaattagattatatgatttcaaaaaccctgaaaaatctata
attttctgtagaacaaaaaaagaggttgatagattatctacttttttagtatctcaaggt
ttttctgctaaaggtcttcatggagatatggaacaaagacaaagggaagaggttattaac
tctttcaaaaaaggaaaattagagattcttattgcaactgatgttgctgcaagaggtctt
gatgtaaatgatgtttctcacgtatttaactatcatcttccatttgattcagagtcttat
gttcatagaataggaagaacaggaagagcaggaaaagacggtatggctgtttctattgtt
actccccatgaatttagaatgataaaaaagattcaaagtgatacaggtggaaaactagaa
gcaaaagttataccaaatattagctcagtaaaagagaaaaaaacaaactctttaaaaagc
aaaatctgtgaacaaaaagtttatgattctggagtaaatttagttgaaagtttatcagaa
gagtatgatttagaaacaatagctcacaaattggcatctttattaactaatgatacttat
gttaaaggtaataacaatattggtaaatctcaaaatgatattgaaaagcttttaaaaaga
tcaagagaagataatggcaaagcaaatagaagaggtagtggtaatttcagagatagaaat
aacaataacagaagaagaaatccttcaggaaatagaagacaaagtagaagagggtaa
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