Halarcobacter ebronensis: AEBR_0403
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Entry
AEBR_0403 CDS
T06616
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03420
Nucleotide excision repair
hebr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AEBR_0403
03430 Mismatch repair
AEBR_0403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hebr03400
]
AEBR_0403
Enzymes [BR:
hebr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEBR_0403
DNA repair and recombination proteins [BR:
hebr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AEBR_0403
MMR (mismatch excision repair)
Other MMR factors
AEBR_0403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
DUF4252
AAA_11
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QKF80912
LinkDB
All DBs
Position
392697..394751
Genome browser
AA seq
684 aa
AA seq
DB search
MSENFLNSLNESQKIAAQHIDGSLLILAGAGSGKTKTITTRLAYLISIGIDPSSILTLTF
TNKAATEMRERAYAMIDSSSVNTPPLLCTFHKFGLLFLKFHMSELNRKNSFIIIDNDDKK
RILKTIDKEITTSLLVSEISKYKNTLLTPSEAKIAAQLKLYQQIADIYEKYEAYLLKNNL
VDFDDLLLLPYLILEKNEELAKQTSQRYQFIMVDEYQDTNELQYKLLRKLCTTHNNLCVV
GDDDQSIYGWRGATIKNILNFADNFKDTKIVKLEENYRSTDTILEHANQLIEHNRDRLGK
KLIGTREKGESVKVYESSDENEETRKIIDDITKLVARGESARNIAILFRVNALSRSLEEG
FNRAGINYRLIGGMKFYERAEIKDLIAYFRLLTNSTDNFSLKRVANKPKRGIGKTTLDKL
DDLSNETKKPIFNILEEYSPEELSTIVGKKNSRTLKVFIASIMDLRDMLEESKMRFLDSF
EETFDYRASFDNVPDGFDRQGNIDEFYGYIRDFFIQNPHLNLEDFLNEIALESEQSELTD
QAVSMMSIHSSKGLEYKHLFVIGLEEGFFPIIGDGSDIEEERRLGYVALTRAMDTLTLSF
VHSRFYKGKRATLLKSRFLSESGLIKGSLTIEKQSSYKKGDLVQHKIFGMGRVQKAEKAG
KDFKLTINFGGQRRDILSSFVEKI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaattttttaaattcacttaatgaatcgcagaaaatagctgctcaacatatc
gatggctctttattaattttagcaggagctgggtctggtaaaactaaaacaattactact
agacttgcatatttaatctctattggaattgatccaagctctattttaacgctgactttt
actaataaagcggcaactgagatgagagaaagagcttatgctatgatagattcttcttct
gtaaacactccaccacttctttgtacttttcacaaatttggattactttttttaaaattt
catatgagtgaattaaatagaaagaactcatttattattattgataatgacgataaaaaa
agaattttaaaaacaattgataaagaaataacgacatcattattggtttcagagatctca
aaatataagaatacattattaactccaagtgaagcaaaaatagcagcacaacttaaactt
taccaacaaattgctgatatttatgaaaaatatgaagcttaccttttaaaaaacaatcta
gttgactttgatgatttattacttcttccttatcttattttggaaaaaaatgaggagtta
gccaagcaaaccagccaaagatatcagtttataatggtagatgagtatcaagatacaaat
gaattacaatataaactactaagaaaactttgtactacacacaacaacctttgtgttgtt
ggtgatgatgaccaatctatttatggttggagaggtgcaacaattaaaaatattctaaat
tttgcagataattttaaagatacaaaaattgttaagttagaagagaactatagatctact
gatacaatcttagaacacgctaatcaattaatagaacacaatagagacagacttggtaaa
aagcttattggaaccagagaaaagggtgagagtgtaaaagtttatgaatcaagtgacgaa
aatgaagagacaagaaaaataattgatgatataactaaacttgtagcaaggggtgaatct
gcaagaaatattgcaattttatttagggtaaatgcactttcaagatctttggaagagggg
tttaatagagctggaataaactatagacttattggtggaatgaagttctatgaaagagca
gagattaaagatttaattgcatactttagacttttaacaaattctactgataatttttca
ctaaaaagagtggctaacaaaccaaaaagagggataggaaaaacaacactcgataaacta
gatgatttatcaaatgagacaaaaaaacctatttttaatattttagaagagtattctcct
gaggagttatcaaccattgttggaaagaaaaactcaagaactttaaaagtttttatagct
tctattatggatttaagagatatgttagaggaatcaaagatgagatttcttgactcattt
gaagagacttttgattatagagcctcttttgataatgttcctgatggttttgatagacaa
gggaatattgatgagttttatggatatattagagatttttttattcaaaatccacactta
aatttagaagattttttaaatgaaattgctttagagtctgaacaaagcgagttaacagat
caagctgtatcaatgatgagtattcactcttcaaaaggtttagagtataaacatctattt
gtaattggacttgaagaaggatttttccctataattggtgatggaagtgacatagaagag
gagagaagattgggatatgttgccctaacaagagctatggatactttaactctctcattt
gttcattctagattttacaaaggtaaaagagctactttattaaagagtagatttttaagt
gaatcaggccttataaaaggaagccttacaatagaaaaacaatcttcatataaaaaaggg
gatttagttcaacacaaaatctttggtatgggacgagttcaaaaagcagaaaaggctggc
aaagattttaaactaaccataaactttggtgggcaaagaagggatattctttcatcattt
gttgaaaaaatctaa
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