Halarcobacter ebronensis: AEBR_0636
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Entry
AEBR_0636 CDS
T06616
Symbol
groEL
Name
(GenBank) 60 kD chaperonin (cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEBR_0636 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hebr03019
]
AEBR_0636 (groEL)
03110 Chaperones and folding catalysts [BR:
hebr03110
]
AEBR_0636 (groEL)
03029 Mitochondrial biogenesis [BR:
hebr03029
]
AEBR_0636 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hebr04147
]
AEBR_0636 (groEL)
Enzymes [BR:
hebr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AEBR_0636 (groEL)
Messenger RNA biogenesis [BR:
hebr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AEBR_0636 (groEL)
Chaperones and folding catalysts [BR:
hebr03110
]
Heat shock proteins
HSP60 / Chaperonin
AEBR_0636 (groEL)
Mitochondrial biogenesis [BR:
hebr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AEBR_0636 (groEL)
Exosome [BR:
hebr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AEBR_0636 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AEBR_0636 (groEL)
Exosomal proteins of breast cancer cells
AEBR_0636 (groEL)
Exosomal proteins of colorectal cancer cells
AEBR_0636 (groEL)
Exosomal proteins of bladder cancer cells
AEBR_0636 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QKF81144
LinkDB
All DBs
Position
632685..634316
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFSDSARNKLYAGVEKLADAVKVTMGPRGRNVLLQKSFGAPTITKDGVSVAREIE
LADTLENMGAQLVKEVASKTADQAGDGTTTATVLAHSIYKEGLRNVTAGANPISLKRGMD
KACEAILANLKTLSKVVAEKKEIEQVATISANADSAIGSMIAEAMDKVGKDGVITVEEAK
GISDELEVVEGMQFDRGYLSPYFVTNSEKMIAELDNPFILLYEKKISNLKEMLPILEAVN
QSGRPLLIVAEDVDGEALATLVVNRLRGSLNIAAVKAPGFGDRRKAMLQDIAVLTNGTVV
SEEMGMKLESCGTEVLGTASKIVIDKDNTTIVDGSGTSEAVAGRVNQIKAEIANTTSDYD
REKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIR
AASKVKLDLEGDEEIGAHIVLRAIKAPMKQIAINAGFDAGVVVNEVEKSDNDNFGFDAAT
GQYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVTDVKEDKPTPAMPDMGGMGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagattaaatttagtgatagtgcaagaaataaattatacgcaggtgttgaa
aagttagctgatgctgtaaaagttacaatgggtcctagaggaagaaatgtacttcttcaa
aaatcttttggtgcaccaactattacaaaagatggtgtttctgttgcaagagagattgaa
cttgcagatactttagaaaatatgggagcgcaacttgtaaaagaggttgcttcaaaaact
gctgatcaagcaggagatggtactacaactgcaacagtacttgctcactcaatttataaa
gagggtctaagaaatgtaactgctggagcaaatccaattagtcttaaaagaggtatggat
aaagcttgcgaagcaattttagctaatttaaaaacattatcaaaagttgttgcagagaaa
aaagagattgaacaagttgctacaatctctgcaaatgcagatagtgcaattggttctatg
attgctgaagctatggataaagtaggaaaagatggtgtaattactgttgaggaagcaaaa
ggtatttctgatgaattagaagttgttgaaggtatgcagtttgatagaggttacctatca
ccatactttgtaacaaactctgaaaaaatgattgcagagcttgataatccatttatttta
ctttatgagaaaaaaatctctaacttaaaagagatgttaccaattttagaagctgtaaat
caatctggaagacctttattaattgttgctgaggatgtagatggtgaagcacttgcaact
ttagttgtaaatagattaagaggttcattaaatattgcggctgttaaagctcctggattt
ggggatagaagaaaagcaatgttacaagatattgcagtattaacaaatggtacagttgta
tctgaagagatgggaatgaaacttgagtcttgtggaactgaagttttaggaactgcatct
aaaattgttattgataaagataatacaactatcgttgatggaagtggtacatctgaagca
gtagcaggaagagtaaatcaaattaaagcagagattgcaaatactacaagtgattatgat
agagagaaacttcaagagagacttgcaaaactttctggtggtgttgctgttattaaagtt
ggagctgcaacagagactgaaatgaaagagaaaaaagatagagttgatgatgcattatct
gcaacaagagctgctgttgaagagggtattgtaattggtggaggtgctgcactaattaga
gctgcatctaaagttaaattagatttagaaggtgatgaagagattggtgcacatattgta
ttaagagctattaaagcgcctatgaaacaaattgctataaatgctggatttgatgcaggt
gttgtagtaaatgaagtagaaaaatctgataatgataactttggttttgatgctgcaaca
ggtcaatatgttgatatgtttgaagcaggaattgttgaccctgcaaaagttgaaagagtt
gcaatgcaaaatgcagtatcagttgcatctcttcttttaacaactgaagcaacagtaaca
gatgtaaaagaggataaaccaactcctgcaatgcctgatatgggtggaatgggaatgcca
ggtatgatgtaa
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