KEGG   Halarcobacter ebronensis: AEBR_0988
Entry
AEBR_0988         CDS       T06616                                 
Symbol
tssH
Name
(GenBank) type VI secretion system, ClpV1 family ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hebr  Halarcobacter ebronensis
Pathway
hebr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hebr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AEBR_0988 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hebr02044]
    AEBR_0988 (tssH)
Secretion system [BR:hebr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AEBR_0988 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 AAA_14 AAA_7 nSTAND3 Sigma54_activat TniB NACHT AAA_30 IstB_IS21 RuvB_N NBD_SMAX1 AAA_29 AAA_27 Zeta_toxin DUF2583 ABC_tran
Other DBs
NCBI-ProteinID: QKF81487
LinkDB
Position
993877..996429
AA seq 850 aa
MKLELKDLINSLDLNTKRYLEDSAQRCVQRGGNEIIIEDVLYSMLENELSVFRAVLEQYK
IDPQEVFNSVQSSLKLSNTESGNPIFSILLIQWLEDSYLTTKVTLELTEITESSLILSLF
DNAIKYSNTAYFKLLKDIDFEEVKGLIIGLNSEAIKKTSSKNGTKKALEKGSELEKYTTN
LTILAKEGKIDPVLCRDAEIKQAIDILLRRRKNNPILVGEAGVGKTAVVEGLALKIIQKE
VPDYLYNAQILSLDIGALQAGASVKGEFERRLQAVIKEIQSSTQFIILFIDEAHTLIGAG
GNEGGSDAANLLKPALARGELRTIAATTWLEYRKYFEKDPALSRRFQKINLLEPSVEEAI
TILRGLCHKYEEVHNVYIEDEAIRAASILSARYITGRQLPDKAIDVLDTACANVKISKTN
IPYELQKINTKILEKEREKLHLSRDSDKSIQDYSLQIEKLDSEIEDLFDNKERIEENWKN
QKELLEKIEATVDKESLVKLNIELKELQKEGCYIYKHVTKEQIAEVISSWTGIPLGSMVQ
EQIKTVMQLEEKMKERIIGQDEAISYLNTFLQISISGLKNENSPAGVFLLVGPSGVGKTE
TARAIADLMYGGERFITTINMTEFQEKHTISRLIGSPPGYVGYGEGGQLTDPVRVKPYSV
ILLDEIEKAHPDILNLFYQIFDKGVANDGEGRVIDFKNTIIIMTSNLATEQITQLWLNNK
DITMQEVTKEITPTLLAYLKPALLGRMNTIAYLNLKDDSLKEIAKLKLKILEKQLEKKEI
ELVLDEKFLDYVVSLSNSVDTGARNIDLIINTNLTPKLSKYILDASLNDNKLSSLIVSMD
DNSEIYITHK
NT seq 2553 nt   +upstreamnt  +downstreamnt
atgaagttagaactaaaagatttgattaattctttggacttaaatacaaaaagatattta
gaggattctgctcaaagatgtgttcaaagaggtggaaatgaaattataattgaagatgtt
ttatatagtatgttagaaaatgagctaagtgtttttagagcagttttagaacagtataaa
atagatcctcaagaggtatttaattcagtacaatcaagtttaaaattgtctaatactgaa
agtgggaatccaatcttttcaattttgcttattcagtggttagaggattcatatcttaca
acaaaagttactttggaattaactgagattacagaatcttctcttatcttatctttgttt
gataatgcaataaagtattcaaatactgcatattttaaactattaaaagatattgatttt
gaagaagtaaaaggtttaattattggtttaaatagtgaagcaataaaaaaaacttcatca
aaaaatggaacaaaaaaagctttggaaaaaggttcagagttagaaaaatatactacaaat
ttaactattcttgcaaaagaggggaaaattgatcctgtattgtgcagagatgcagagata
aaacaagcaatagatatattattaagaagaagaaaaaataatccaattttagttggtgaa
gcgggtgttggtaaaactgctgttgtggaaggtcttgctctaaaaattatccaaaaagag
gtacctgattatttatataatgctcaaatattatctttggatataggagcattgcaagca
ggagctagtgtaaaaggtgagtttgaaagaagattacaagcagtaataaaagagattcaa
tcaagtactcaatttataattctttttattgatgaagcccacactttaattggagcaggg
ggaaatgaaggtggttcagatgcagcaaatcttctaaaaccagcattagcaagaggagag
ttaagaacaattgccgcaactacttggctggaatatagaaaatactttgaaaaagatcca
gctctttcaagaagatttcagaaaataaatttattagaaccttctgttgaagaggcaata
actattttaagagggctttgccataaatatgaggaggttcataatgtttatattgaagat
gaagcaattagagctgcctcaattttatctgcaagatatataacaggaagacaacttcct
gataaagctatagatgttttagatacagcttgtgcaaatgtaaaaattagcaaaacaaat
attccctatgaattgcaaaaaataaatacaaagatattagaaaaagagagagaaaaactt
catttaagtagagatagtgacaaatctattcaagattactctttacaaatagagaaatta
gactctgagatagaagatctttttgataataaagagagaattgaagagaactggaaaaat
caaaaagagctcttggagaaaattgaagcaacagttgataaagagagtttagtaaaacta
aatatagagttaaaagagttacaaaaagaggggtgttatatctataaacatgtaacaaaa
gagcaaattgctgaggtaatatcttcttggacaggaatacctttaggaagtatggttcaa
gaacaaataaaaacagttatgcagcttgaagagaagatgaaagagcgaattattggtcaa
gatgaagcaatctcttatctaaatacttttttacaaatttcaatttcaggattaaaaaat
gaaaattctccagcaggtgtttttttattagttggtccaagcggagttggaaaaactgaa
acggcaagagcaattgcagatttgatgtatggtggagagagatttattacaactataaat
atgacagagtttcaggaaaaacatacaatttcaagacttattggttctcctcctggttat
gttggatatggagaaggtgggcaattaacagatcctgttagagtaaaaccttattcagtg
attcttttagatgagattgaaaaagcacatccagatattttaaatcttttttatcagata
tttgataaaggagtggcaaatgatggagagggaagagtaatcgattttaaaaatacaatt
attataatgacatcaaatcttgcaacagaacaaataacacagctttggttaaataataaa
gatataacaatgcaagaggttacaaaagagattacaccaacacttttggcatatttaaaa
cctgcacttctaggaagaatgaatactattgcatatcttaatttaaaagatgattcttta
aaagagattgcgaaacttaaattgaaaattttagaaaaacagcttgaaaaaaaagagata
gaacttgttttggatgagaagtttttagattatgttgtctctttaagtaatagtgttgat
acaggagcaagaaatatagatttaattataaacacaaatcttactccaaaactatcaaaa
tatatattagatgcaagtttaaatgataataaattatcttcacttatcgtttcaatggat
gataatagtgaaatttatattacacataaataa

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