Halarcobacter ebronensis: AEBR_1209
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Entry
AEBR_1209 CDS
T06616
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AEBR_1209 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hebr03021
]
AEBR_1209 (rpoA)
03400 DNA repair and recombination proteins [BR:
hebr03400
]
AEBR_1209 (rpoA)
Enzymes [BR:
hebr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AEBR_1209 (rpoA)
Transcription machinery [BR:
hebr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AEBR_1209 (rpoA)
DNA repair and recombination proteins [BR:
hebr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AEBR_1209 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QKF81703
LinkDB
All DBs
Position
1227885..1228883
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFADTPFLPTEVEIEAISDNEAKISAYPFESGYAITLAHPLRRLLLSSSVGYAPIAVK
IEGASHEFDSLRGMLEDIAIFIINLKNIKFKINGDEEQVIVEYSFDGPKEIKGEDLVNSD
VEVVSPDVHLATINSDCNLTFSVIIQRGIGYMPSEDIRDMVSTDYIPLDAFFTPVKKVVY
NIEKMLVEDNPNFEKAVFTVQTNGQITPVAAFKEAVSIMYSQMSVFNKVFDLSEVTVNDS
GEEPVELKDLIVKIDDLNLSARSFNSLDRAGLKFLGELVLMSEVEVKNIKNLGKKSFDEI
AEKLDSLGFPIENTLPENVASALRRKLEQLKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgcagatacaccatttttaccaacagaggttgagatagaagctatcagt
gacaatgaagctaaaatatcagcatatccatttgagagtggttacgctatcacattagcg
cacccattaagaagacttttattaagttcttcagttgggtatgctcctattgcagtaaaa
attgaaggtgcttctcacgagtttgactcgttaagaggaatgcttgaagatatagctatt
tttataattaatcttaaaaacattaagtttaaaattaatggtgatgaagaacaagttatt
gttgaatactcttttgatggtccaaaagagattaaaggtgaagatttggtaaactctgat
gtagaagttgtaagtccagatgttcacttagcaacaattaactctgactgtaacttaaca
ttctctgttattatccaaagaggtattggttatatgccatctgaagatattagagatatg
gtaagtacagactatattccacttgacgctttctttactcctgtaaaaaaagttgtttat
aatatagaaaaaatgttagttgaagataatcctaactttgaaaaagctgtatttacagta
caaacaaatggacaaattactccagttgctgcatttaaagaagcagtatcaattatgtac
tcacaaatgtcagtatttaacaaagtatttgatttatctgaagttacagttaatgattct
ggtgaagagccagttgaattaaaagatttaattgtaaaaattgacgatttaaacctaagt
gctagaagtttcaattctttagatagagctggactaaaattccttggtgaattagtactt
atgagtgaagtagaagttaagaatattaaaaatttaggaaaaaaatcttttgatgagatc
gcagagaaattagactctttaggtttcccaattgagaatacacttcctgaaaatgttgct
tcagctttaagaagaaagctagagcaattaaaagcataa
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