Halarcobacter ebronensis: AEBR_1584
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Entry
AEBR_1584 CDS
T06616
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEBR_1584 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hebr03019
]
AEBR_1584 (pnp)
03016 Transfer RNA biogenesis [BR:
hebr03016
]
AEBR_1584 (pnp)
Enzymes [BR:
hebr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AEBR_1584 (pnp)
Messenger RNA biogenesis [BR:
hebr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AEBR_1584 (pnp)
Transfer RNA biogenesis [BR:
hebr03016
]
Prokaryotic type
tRNA degradation factors
AEBR_1584 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_2
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QKF82067
LinkDB
All DBs
Position
complement(1606039..1608216)
Genome browser
AA seq
725 aa
AA seq
DB search
MSTVCEFELNGKQEIFEFGKVAKQANGSVLAKLGNAVVLATVVSEFDNPVEEDFTPLTVQ
YVEKTYASAKLPGGFIKREAKPSDFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
NVDLQVLALNAASAALYTSNLPIKKSVVGVRVAKVEGEYIVNPNSEQLNESTLDLYVAGT
KEELLMIEMKAISSEEMVEIDIEAFTKVHKTNEMSEDELVEAISVAQNALKASNETYEIG
FQSVSKEAVEIKLVEFTIDEAVIKHVRDNYLEEIKFALQKLAKSERATELKDVSKKIMAD
TYCSSNGIEFSTIYEAVSLVKREVVRAMIVNDKVRADGRGLKEVRPITIETNILPSAHSS
CLFTRGETQALVVGTLAGTKDGQMYEVLTEKSTRVENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLAKKALEATIDKDYEDTVRLVSEILESNGSSSMATVCGGSLALKAAGVPVSSL
VAGVAMGMVVEGNNYSVLTDIMGLEDHDGDMDFKVAGTKEGITALQMDIKLGGIELSVLR
EALYQAKEGREHILGIMEEAALEIVPSEALPLVEQFAIDPSKIMVVIGKAGSTIKEIIEK
FSVSIDLDRDSGNVKVSGENKQNVLDACEHIKSISSSSRRDNDKKSIDFEKLYEIDEVLT
GKVVRITDFGAFVELPKGGEGLLHISKLSKERVTRVEDVLKVEDNVEIKVLKVKKDRIEL
ALNGI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtttgtgaatttgagttaaatggaaaacaagaaatttttgagtttgggaaa
gttgccaaacaagctaatggatcagtattagcaaaattagggaatgctgttgtattagct
acagttgttagtgaatttgacaatcctgttgaagaagattttacacctttgactgtacaa
tatgtagagaagacttatgcttctgctaaacttccaggtggttttataaaaagagaagca
aaacctagtgattttgaaacattaacttcaagagttattgatagaagtttaagaccacta
ttcccaaaagggtatgtttatcctacaacaataactgttatggttttaagtgcagacaaa
aatgttgatttacaagttttagctttaaatgctgcaagtgctgcattgtatacttctaat
ctcccaataaaaaaatcagttgttggagttagagttgcaaaagttgaaggagaatatatt
gttaatcctaattctgaacagcttaatgaatcaactttagacctttatgttgctggaact
aaagaagagttattaatgatagagatgaaagctatttcatctgaagagatggttgaaatc
gatattgaagcttttacaaaagttcataaaacaaacgaaatgtctgaagatgaactagtt
gaagcaatttcagtagctcaaaatgcgttaaaagcatcaaatgaaacttatgaaataggg
tttcaatcagtttcaaaagaggctgttgaaattaaattagttgaatttacaatagatgaa
gctgttataaaacatgtaagagataattatttagaagagataaaatttgctttacaaaaa
ttagcaaaaagtgaaagagcaactgaacttaaagatgtatctaaaaagattatggctgat
acttattgcagttcaaatgggattgaattttcaactatttatgaagcagtttctttagtt
aaaagagaagttgtaagagcaatgattgtaaatgataaagttagagctgacggaagaggt
ttaaaagaggttagaccaattactattgaaacaaatattttaccatctgctcactcttca
tgcctttttacaagaggtgaaactcaagcattagttgttggaactttagcaggaactaaa
gatggtcaaatgtatgaagtgttgactgaaaaatcaactagagtggaaaactttatggtt
cactacaattttccaggtttctctgttggtgaagcaaaacctatgtttggggtaggaaga
agagagctaggacatggtaacttagctaaaaaagcacttgaagcaactatagataaggat
tatgaagatacagtaagacttgtttctgaaattttagagtcaaatggatcttcttctatg
gcaacagtttgtggaggttctttggctcttaaagcagcaggtgttcctgtatcaagtctt
gttgctggtgttgcaatgggaatggttgttgaaggtaataattactctgtattaactgat
attatgggattagaagatcatgatggtgatatggattttaaagttgctggaactaaagaa
gggataacagctcttcaaatggatatcaaacttggtggaatagagttatcagtattaaga
gaagcactatatcaagcaaaagagggtagggaacatattttaggtattatggaagaagct
gcactagaaattgtaccaagtgaagcattacctttagttgaacaatttgcaattgatcca
agtaaaattatggttgttataggtaaagctggttcgactattaaagagattattgaaaaa
ttctctgtatctattgatttagatagagacagtggaaatgtaaaagtaagtggtgaaaat
aaacaaaatgtattagatgcttgtgaacacattaaatctatttcaagtagttctagaaga
gacaatgacaaaaagagtattgactttgaaaaactttatgaaatagatgaagttttaaca
gggaaagtagttagaattacggactttggagcatttgttgaattaccaaaaggtggagaa
gggcttcttcatatatctaagctttctaaagaaagagttacaagagttgaagatgtttta
aaagttgaagataatgttgaaattaaggttttaaaagttaaaaaagatagaatagaatta
gctttaaatggtatttaa
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