Halarcobacter ebronensis: AEBR_2949
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Entry
AEBR_2949 CDS
T06616
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03410
Base excision repair
hebr03430
Mismatch repair
hebr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AEBR_2949 (recJ)
03430 Mismatch repair
AEBR_2949 (recJ)
03440 Homologous recombination
AEBR_2949 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hebr03400
]
AEBR_2949 (recJ)
DNA repair and recombination proteins [BR:
hebr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AEBR_2949 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AEBR_2949 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AEBR_2949 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
UCH_N
Toprim
Motif
Other DBs
NCBI-ProteinID:
QKF83400
LinkDB
All DBs
Position
3033587..3035152
Genome browser
AA seq
521 aa
AA seq
DB search
MSKITKKELFDILKARHENNQYSRLAQIPEPNSFKDIDLAIKRIKKAIQSNEKITIVGDY
DVDGVVSTTIIVDFFKRAGIKVDYIIPNRFTHGYGLSPKIVDMIDEGLVITVDNGISANE
AAKKLKEKNIDLIITDHHTVGEELPNAIAIINPKQENCNFPFKDICGAQVAWYLCAALKK
ELNLNVNLQEFFDLLSVAIIADIMPMTSLNYTMVKYGLKQIKTSNRPAFIKINEMMHKDL
YVSDDVGFTIAPKINSAGRMDDASVALSFLLSESVYEANDSLQLLEELNCYRKVLQERIS
QKAILATQEEDNAVVVWGEDWHEGVIGIVASKLSNAYKKPAFIFSIKNGMAKGSARANAN
IDLYTIISETSDILKGFGGHKNAAGLSLEAKNLEEFKKRINEILDIEPEDLHIEHDVLGE
LDVSCVDNEFLDIIEKFEPYGLGNHRPIFKVTNSKIIKSQLFGKDKNHLKLTLNNNGFIF
EALQFYTENRDFKEYVDLVISINKNEFRGEISPQFLIQDIL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattacaaaaaaagaactttttgatatactaaaagcaagacatgaaaacaat
cagtattctcgtcttgcacaaattcccgaaccaaatagctttaaagatatagatttagcc
attaaaaggattaaaaaagctattcaatcaaatgaaaaaattactattgttggtgattac
gatgtagatggagtagtatcaactaccattattgttgatttttttaaaagagcaggaata
aaagttgattatatcattccaaatagatttacccatggatatggactctcacccaaaata
gttgatatgattgatgaaggtttggtaatcaccgttgataatggtatctctgcaaatgaa
gctgcaaaaaagctaaaagagaaaaatattgatttaatcataacagaccatcatacagta
ggagaagaacttccaaacgctatagcaatcataaatccaaaacaagagaactgtaatttt
ccttttaaagatatttgtggagctcaagttgcatggtatttatgtgcagcacttaaaaaa
gagctaaacttaaatgtaaatctacaagagttttttgatctacttagtgtagctattatt
gcagatattatgccaatgaccagccttaattatactatggttaaatatggccttaaacag
ataaaaacttcaaatagaccagcttttattaaaataaatgagatgatgcacaaagattta
tatgtctctgatgatgttggttttaccattgctccaaagataaatagtgcaggaagaatg
gatgatgcctctgttgctctctcttttttactatctgagagtgtttatgaagcaaatgac
tctttacaactgcttgaagagttaaactgctatagaaaggttttacaagagagaatctct
caaaaagcaatacttgcaacccaagaagaggataatgcagtagttgtttggggagaagat
tggcatgagggagttattggaatagttgcttcaaaactctcaaacgcatataaaaaacca
gcctttatcttctcaattaaaaatggtatggcaaagggaagtgcaagggcaaatgcaaat
attgacctttatacaattatctctgaaacttctgatattttaaaaggttttggtggacat
aaaaatgcagcaggactctcactggaagcaaaaaatcttgaagagtttaaaaaacgaata
aatgagattttggatattgagccagaagatttacacattgaacatgatgtattaggagag
ttagatgtctcttgtgtggataatgaattccttgatattatagagaaatttgagccctat
ggtttaggtaatcaccgaccaatttttaaagtaacaaactctaaaatcataaaatctcaa
ctctttggaaaagataaaaaccacttgaaactaacactaaataacaatggctttattttt
gaagctttacaattttatactgaaaatagagattttaaagagtatgttgatttggtaatt
tcaataaataaaaatgagtttagaggggaaataagccctcagtttttaatacaagatatc
ttatag
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