Halarcobacter ebronensis: AEBR_2956
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Entry
AEBR_2956 CDS
T06616
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hebr
Halarcobacter ebronensis
Pathway
hebr03030
DNA replication
hebr03430
Mismatch repair
hebr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hebr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AEBR_2956 (dnaE)
03430 Mismatch repair
AEBR_2956 (dnaE)
03440 Homologous recombination
AEBR_2956 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hebr03032
]
AEBR_2956 (dnaE)
03400 DNA repair and recombination proteins [BR:
hebr03400
]
AEBR_2956 (dnaE)
Enzymes [BR:
hebr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AEBR_2956 (dnaE)
DNA replication proteins [BR:
hebr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AEBR_2956 (dnaE)
DNA repair and recombination proteins [BR:
hebr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AEBR_2956 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF3783
Motif
Other DBs
NCBI-ProteinID:
QKF83407
LinkDB
All DBs
Position
3039938..3043483
Genome browser
AA seq
1181 aa
AA seq
DB search
MSQTPEFTHLHLHTEYSLLDGANKIKPLAKKVKKMGMKSVAMTDHGNMFGAIDFYNAMRA
EGIKPIIGMEAYIHNSEDIGDKTTRQRFHLCLYAKNEIGYKNLMFLSSQAYMHGFYYYPR
INKTLLRENSEGLVCSAACLQGEVNWHLNTNNERNVKFGAKGYEKAKEIALGYKEIFGDD
FYLEIMRHGIGDQLFVDDLILKISKETGIKVVATNDTHYLEQKDAEAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIATTQEIADKCNLEIKLGNPTPPNFKFTR
QKLIELNLEIPEPDQEYSLKNDIALFEHKCREGLEKRLEIVPKEKHEEYRDRLEVEINII
NNMKFPGYMLIVWDFVIVAKQMKIPVGPGRGSAAGSLVAYSLFITDIDPMPYGLLFERFL
NPERVSMPDIDMDFCQSRRGEIIDYVVQQYGRSNVAQIITFGKLLAKGVIRDVARVLDMP
YSKADAMAKLIPDELGINLTQSWEKEPKIKELCETDPQAKRVWDFALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGMETIATQYNGKYVEDVDLIKFDFLGLKTLTVIDEANKLV
EKRYGKRINFIHEDVNDLGVYELIQSGNTIGLFQIESAGMQDLAKRLKPSGFEDIIAMLA
LYRPGPMESGMLDDFIDRKHGRAEISYFYDEFVEPLKPILEPTYGVIVYQEQVMQIVQTI
GGFSLGGADLVRRAMGKKIKEEMDRLKGEFAEGGVKKGFVKEHCEELFDLIVKFAGYGFN
KSHSAAYGLVTFYTSFLKKYYPTEFMAALLTLEKDNTDKVVKYVDEVKRLKIELFPPDIN
KSDLVFTATQIDGKEVVMFGMGAIKGAGDVAIKSILTERNKNGNFKDLADLISRIDGTKV
NKRVLESLIKAGALDSFAYSRRALLEQIELIVESVGKAMQLKKQTTSSLFGDDKDMLKVE
VELEHLPEFEPKEILEFEKASLGFYVSGHPLDSYRDDLEKISYTLSSELSEVADGSQAII
IGKIEEITEKISKKGNKFGIANILDLHGNIEVMLFENRLKELEDDFDLNEPIAFKVKVTH
DGDFTRLNILKIETLKDAQKEKIKTKHKEKEEPPLTIAIPYEEKEDIIYKLFDLVAHNQG
KRELKIIIKTKLADIELETDFKVTSNVEEYIKQINGAFVVA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaactccagaatttacacacttacatttacacacagaatattcacttttagat
ggtgctaacaaaataaaacccttagcaaaaaaagtaaaaaagatgggaatgaaaagcgtt
gctatgactgaccatgggaatatgtttggagcaattgacttttacaatgcaatgagagca
gaagggattaaacctattattgggatggaagcttatattcacaactcagaagatatagga
gacaaaaccacaagacagagatttcacttatgtctatatgctaaaaatgagataggttat
aaaaatctaatgtttttaagttcacaagcttatatgcatggtttttattattatccaaga
ataaataaaactcttttaagggaaaattctgaaggtttggtttgcagtgcagcttgtttg
caaggtgaagtaaactggcatcttaatacaaacaacgaaagaaatgttaaatttggtgca
aaaggttatgaaaaagcaaaagagatcgctttgggatacaaagagatttttggggatgat
ttctatttagagattatgagacatggtattggggatcaactctttgttgatgatttaatt
ctaaaaatctcaaaagagacaggtatcaaggtagttgcaacaaacgatacccactattta
gagcaaaaagatgctgaagcccacgaagcttttatgtgtatagctatgaataaactctat
gatgacccaaatagattaagacacagtgttcatgagttttatctaaaatctccagagcag
attgcaaaactttatgctgatattcctgaagcaatagccacaacacaagagattgcagac
aaatgtaatttggagataaaattagggaaccctactccaccaaactttaaatttacaaga
caaaaactaatagaacttaatcttgagattccagaaccagatcaagagtattcactaaaa
aacgatattgcactgtttgaacataaatgtagagaaggtcttgaaaaaagacttgagatt
gttccaaaagagaaacatgaagagtatagagatagactagaagttgagattaatattata
aacaatatgaagttccctggatatatgttaattgtttgggatttcgtaattgttgcaaaa
cagatgaagattccagttggaccaggaaggggatcagcagcaggaagtttggttgcatat
tctttgtttattacagatattgatcctatgccttatggtcttctatttgagagatttcta
aatccagagagggtgtcaatgcccgatattgatatggacttttgccaaagtagaaggggt
gaaattattgattatgttgtacaacaatatggtcgttcaaacgttgcgcaaatcatcacc
tttggtaaacttcttgcaaaaggggttattagagatgttgcaagggttcttgatatgccc
tactcaaaagcagatgccatggcaaaacttattccagatgaacttggaattaatcttact
caatcatgggaaaaagaaccaaaaataaaagagctttgtgagacagatcctcaagcaaaa
agagtttgggattttgctttagctttagaaggcttaaatagaaatgcaggaactcatgca
gctggtgttgttatctcaaatgaacctttatggaaaaaaactcctttatttaaaccttca
gggatggagacaattgcaacccaatacaatggtaaatatgttgaggatgttgacttaatc
aaattcgacttcttgggtcttaagacccttacagttattgatgaagcaaataaacttgtt
gaaaagagatatggaaaaagaattaactttatccacgaagatgtaaacgacttaggtgtt
tatgaactaattcaatcgggaaatacaattggactattccagatagaatctgctggtatg
caagatttggcaaaaaggcttaaaccttctggatttgaagatattattgcgatgcttgcc
ctttatagaccagggcctatggaatcaggaatgcttgatgactttattgatagaaaacac
ggacgtgcagagattagctacttttatgatgagtttgtagagccacttaaacctattctt
gagccaacttatggagttattgtttaccaagaacaggttatgcaaattgttcaaacaatt
ggtggtttttcacttggtggcgcggacttagttagacgggcaatgggtaaaaagattaaa
gaggagatggatagactaaaaggtgaatttgccgaaggtggagtaaaaaaaggttttgtt
aaagagcattgtgaagagcttttcgacctgattgtaaaatttgccggatatggatttaac
aaatctcactcagctgcttacggtcttgtaactttttatacaagttttcttaaaaaatat
tacccaacagagtttatggcagccctactaactttggaaaaagataatactgacaaagtt
gtaaaatatgttgatgaagtaaaaagattaaaaattgaactatttcctccagatataaat
aaatcagaccttgtatttactgcaacacaaatcgatggtaaagaggttgtaatgtttggt
atgggtgccatcaaaggggctggagatgttgctattaaatcaattcttactgaaagaaat
aaaaatggaaattttaaagatttagcagatttaatctcaagaattgatggaacaaaagta
aacaaaagagttttagaatccctaataaaagctggtgcattagactcttttgcttactca
agaagagctttactcgaacaaattgagttaattgttgaatcagttggaaaagctatgcaa
ctaaaaaaacaaaccacttcatctctttttggtgatgacaaagatatgttaaaagttgaa
gtggagttggaacatttaccagagtttgaaccaaaagagattttagaatttgaaaaagca
tctttaggattttatgtatctggacaccctttagattcgtacagagatgatttagaaaaa
atctcttatacactaagttcagaacttagtgaagttgcagatggctcacaagctattatc
ataggaaaaatagaagagattacagaaaagatttcaaaaaaaggtaataaatttggtatt
gcaaatattctagaccttcatggaaatattgaggttatgctttttgaaaatagattaaaa
gagcttgaagatgattttgatttaaatgagccaattgcctttaaagtaaaagttacccat
gatggagattttacaagacttaatattcttaaaattgagactctaaaagatgcccaaaaa
gagaaaatcaaaacaaaacacaaagagaaagaagagccccctttaacaatagcaattccc
tatgaagagaaagaggatattatctataaactctttgatttagtagcacataaccaagga
aaaagagagttgaaaattattataaagacaaaactagcagatatagagcttgagactgat
ttcaaagttacttcaaatgtggaagagtatataaaacagataaatggagcttttgtagta
gcatga
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