Candidatus Hydrogenosomobacter endosymbioticus: HYD_1610
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Entry
HYD_1610 CDS
T07863
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec03030
DNA replication
hec03430
Mismatch repair
hec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYD_1610
03430 Mismatch repair
HYD_1610
03440 Homologous recombination
HYD_1610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hec03032
]
HYD_1610
03400 DNA repair and recombination proteins [BR:
hec03400
]
HYD_1610
Enzymes [BR:
hec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYD_1610
DNA replication proteins [BR:
hec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYD_1610
DNA repair and recombination proteins [BR:
hec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYD_1610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BDB96028
UniProt:
A0ABM7V8E7
LinkDB
All DBs
Position
complement(171468..174947)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSNTIKSRIIMNEREDKGLKSRVRPRYIALRNCSSFSLLQSSMSIKNLVTAAKEQKMQAL
GLCDRGHLFGALEFAFACKDARMQPIIGCSLTLSADSDFSFAVFAKNDAGYSNLCKLVTM
TTVGQGNNLREKITLNQIEGHTEGLLCLSGSESGFLYKGLLDGKLDSSLSILDEFQKLFP
SRLYIEIFRDGRYSPNSNDVEKQVLQIAYERKLPVIASNEALFLTPDDFESTDTLSCIAD
GKYVQDPDRKRLEKWKYFRSSEEMEKLFEDIPEALQNTVCFAERCGFLLKSKPPVLPSFQ
CELPQTDELIKRSERGLCERLEAQSIEELENRGEKEAGYVSRLRYETEMICKLGFAGYFL
IVSDFIRWAKSQKIPVGPGRGSGASSLVAWSLFITDVDPIRFGLLFERFLNPERVSMPDF
DVDFCQDRRDEVIDYVRKKYGEDRVAHIITFGSLQARAVVRDVGRVLQMPYKQVDGICKL
IPQNPAHPINLSDALKMEPILREMEKNDEQIAYMMKVCLRLEGLYRHASVHAAGVVVGSE
PLCNSVPLYKDENSALPATEFSMKYIEKAGLIKFDFLGLKTLTIIQNAINMAEKNGTHID
ITNIPLDDAKTFDLLRNVETVGIFQLEGSGISSALRNLQPDHFEEIIALGALYRPGPMDE
IPRYVACRHGREAISYAYPELEPILRETFGVIVYQEQVLQIARILAGYSMGGADILRRAM
GKKIKSEMDSQRKTFIDGVLKHTGGTIEKAERLFDQIEKFAEYAFPKAHATPYALLTYQT
AYLKANHPIEFLTSLMEQDIANSDKLSLFTREAKRIGINILPPNINISKAQFSIESSEKG
DKCIRYALAAIKNVGAAAMEKLCFEREKNGKFSDIFDFLERVDCINKKNMESLIEAGVFD
CLCSNRRKLMDSLDLLLSHSSASNKTSDELSLFSQESIRPQLQEIEDWSPHEKLLHEFQA
IGFYLTAHPLEDFCKIEKNFVFSSDICEFLEKNQTNKPFSMIGVVIDVKEKVSKAGNKYA
FINLSDPKGHYEVVAFSDVLGKFTELLKVGKFLHIVASGYVEEDSPKLTVQIVNDLNEMM
EAECDMATIDITNEYQLVELKNLLSELPQGNCDLVLALYEKGKKKTIMLRSGKRISRKNL
INITSKIYSMRALYAQNSK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatacgataaaatcccgcataatcatgaatgaacgtgaagacaaaggtttaaaa
tccagagtaaggcctcgttacattgcccttagaaattgctcatcgttttcgcttttgcaa
agctctatgtcaataaaaaatctagtgacagctgcaaaagaacaaaaaatgcaagcgcta
gggctatgcgacagaggtcacctatttggcgctcttgaatttgcgttcgcatgtaaagat
gctaggatgcagccaattataggatgctctcttaccctaagcgctgattcggacttttcg
tttgctgtgttcgctaaaaacgacgctggctactcaaatctatgcaaacttgtcaccatg
acaacggtagggcaggggaataatttgcgagaaaaaataacactaaatcaaatagagggt
catacagaaggccttttatgtctctccggctctgaaagcggttttttatacaaaggtcta
cttgatggaaagctcgactcttctttgtccattctagatgaatttcaaaaactgttccca
tcgaggctttatatagaaatatttcgagatggacgttattcccctaatagtaatgacgtt
gaaaaacaagtcctgcaaattgcatacgaacgcaagcttcctgttatcgcatctaacgaa
gctcttttcctgacccctgatgattttgaatccacagacactctgagttgtattgcggac
ggaaaatatgtacaggatccggatagaaaacgcctagaaaagtggaaatacttcagatct
tccgaagagatggaaaaattgtttgaagatataccagaggcgcttcaaaacaccgtgtgc
tttgccgagaggtgtggttttttactcaagtctaagccgccggttcttccatcatttcaa
tgcgagcttcctcagaccgatgagcttataaaaagaagcgaaaggggcttgtgcgaaaga
ttagaagcgcagtctatagaggaattagaaaatagaggagaaaaagaagctggatatgtt
tcgaggcttcgctatgaaacagagatgatctgtaaacttggatttgctgggtattttctt
atagtttctgatttcatcaggtgggccaagtcgcaaaaaatacctgtagggcctggaaga
ggctctggagcaagctcgcttgtagcatggagtttgttcataaccgacgttgatccaatc
aggtttgggctattattcgagcgatttttgaacccagaaagggtgagcatgccagatttc
gatgtggatttttgtcaagatcgccgagatgaagtgatcgactacgtgcgaaaaaaatac
ggagaagacagggtcgctcatataatcacgttcggatcgctccaggcaagagccgttgtt
cgtgatgtagggcgcgtgctacagatgccatataaacaggttgacggtatttgcaagctc
attcctcagaacccagcgcatccaataaatctctcggacgctctgaagatggagccaata
cttcgcgagatggagaaaaatgatgaacaaatagcatacatgatgaaggtatgccttcgc
ctcgaagggttgtatagacacgcgtctgttcatgcagctggagttgttgttggcagcgag
cccctttgcaactctgtccctctttataaagacgaaaactcagcgcttcccgccacagaa
ttttctatgaaatacatagaaaaagccggccttattaagttcgattttttaggactaaag
acgcttaccataatacaaaatgccataaatatggcagagaaaaacggaactcacatagac
attacaaatattcctctagacgacgcaaaaacatttgaccttttgcgcaatgtggaaact
gttggaatatttcaacttgaaggaagcggcatcagctctgcgctccgcaacctgcaacca
gaccattttgaagagataatagcgctcggcgctctttatagacccggtcctatggacgaa
attccaagatatgtggcttgtcgccatggcagagaggcgatttcatacgcataccccgaa
cttgagccgatcctgcgcgaaacatttggagtcatagtatatcaagagcaagtattacaa
atagcgagaatactagcgggatatagcatgggcggagctgatattctgcgaagagctatg
ggaaaaaaaataaagtctgaaatggactctcagagaaaaacttttatagacggagtcctg
aaacacactggaggtaccatagagaaagcagaacgtctgtttgaccaaatagaaaaattc
gctgaatacgcgtttccgaaagcgcatgcaacaccatacgctctcctcacatatcaaaca
gcatatctaaaggccaatcaccccatagagtttctcacatcgcttatggagcaagacatt
gcaaactctgataagctaagcttattcactcgagaagcaaagcgcataggaataaacata
ttgccgcctaacattaacatttcaaaagctcaattttctatagaatcatcagaaaaagga
gataagtgtattcgatatgcgctggctgcaattaaaaatgtcggagcagcagcaatggaa
aagctctgttttgaaagagaaaaaaacggcaaattttcagacatattcgattttctcgaa
agagtcgattgcataaacaaaaaaaatatggagagcctaatagaagctggcgttttcgat
tgtttatgcagcaacaggcgtaaacttatggattctctagatctccttctctcacattca
tccgcaagcaacaaaacctccgatgagctctcactattcagccaagaatcaataagacca
cagcttcaagaaatagaagactggagcccgcacgaaaaacttctgcacgaatttcaggcc
atcggattttatctaacagcgcatccgcttgaagatttttgcaagatagaaaaaaatttt
gttttctcgtccgatatatgcgaattcctagaaaaaaaccagactaataaacctttttcc
atgataggagttgtgatagacgtgaaagagaaggtgagcaaagctggtaacaaatatgct
tttataaatttatccgatccaaaagggcattacgaagttgttgcattttctgacgtacta
ggcaaatttacagaacttcttaaggtcggaaaatttttacacatagttgcgagcggttac
gttgaagaggattctccaaaactcaccgtgcaaatcgtaaacgacttgaatgaaatgatg
gaagccgaatgtgacatggcgaccattgacataaccaacgagtatcagcttgtcgaactt
aaaaacctattgtcagaattgccgcaaggaaattgcgatcttgtcctcgcgctatatgaa
aaaggaaaaaaaaaaacgataatgcttcgctctggcaaaagaatttctagaaaaaacctc
atcaatataacgtcaaaaatttattcaatgcgcgccctatacgcacaaaattcaaaataa
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