Candidatus Hydrogenosomobacter endosymbioticus: HYD_2440
Help
Entry
HYD_2440 CDS
T07863
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYD_2440 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hec01007
]
HYD_2440 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hec03016
]
HYD_2440 (aspS)
03029 Mitochondrial biogenesis [BR:
hec03029
]
HYD_2440 (aspS)
Enzymes [BR:
hec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HYD_2440 (aspS)
Amino acid related enzymes [BR:
hec01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HYD_2440 (aspS)
Transfer RNA biogenesis [BR:
hec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HYD_2440 (aspS)
Prokaryotic type
Other AARSs
HYD_2440 (aspS)
Mitochondrial biogenesis [BR:
hec03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HYD_2440 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
BDB96111
LinkDB
All DBs
Position
complement(270755..272602)
Genome browser
AA seq
615 aa
AA seq
DB search
MSFSCHKNCSGSAEIASISSYRTHTCAQLSEDEVGCKVRLSGWVHRVRDLGQILFIDLRD
HYGVTQCVFYSSCSRFIDAQKVSLESVIKVDGVVAKRSPETVNEKISTGGIEVVVESIDV
LSMAGPLPMNVNSGKEFPEETRLKYRFLDLRREKLHKNIVLRSQVVNFLRMRMIEQGFLE
FHTPILTKQSPEGARDYLVPSRLYPGEFYALPQSPQQFKQLLMVSGFDRYFQIAPCFRDE
DPRADRSPGEFYQLDIEMAFATQSEIFEVIEPVLRSVFCEFGGGASVTNIPFPKITYEDA
MLLYGCDKPDLRNPLVIRDLTEEFSSNPCPPFSGAISGGGVVRALVIKADIWQKNSLQKS
FFRSLAQWAEREKAKGIGYVTVEALDVSDEASFSGPIAKFLNERHRGNIFSTLDLGVGDR
VLFIADEKSLAESISGKMRIHLGETLGLVRDGSFELCWIVDFPMYERDKDSGAVIFSHNP
FSMPQGGMDALCSEDPLSIKAYQYDIVCNGIELSSGAIRNHVPEIMYKAFEIAGYGKDHV
DEQFGGMIRAFHYGAPPHGGLAPGIDRMIMLLSGAKNLREVIAFPFSQQVRDLMMDAPSA
VSADSLKELHIRVVR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttagttgtcataaaaactgttctggatctgcggagattgcatcgataagttca
tacagaactcacacatgcgcgcagctatcggaagacgaagttggctgcaaggttcgtctt
tcaggatgggtgcatagggtccgcgatcttgggcagatattgtttatcgacttgagggac
cactatggagtgactcaatgcgttttctactcctcgtgttcgcgctttattgatgcacaa
aaagtgtcgctagagagtgtcataaaagttgacggcgtcgttgcaaagcgctctccagag
actgtgaatgaaaaaatatctacaggggggattgaggttgtcgtagaatcgattgacgtt
ttgtctatggcggggccacttccgatgaacgtcaactctggaaaagagtttccagaagaa
accaggttaaagtatagatttttagatctcagaagagaaaagcttcacaaaaatatagtt
ttgcgcagccaagttgtgaattttttgcgcatgcgaatgatagagcagggatttctagaa
tttcatacgccgattctgactaagcagagtcctgagggagcgcgcgattatttagtccca
agcaggttatatcccggtgagttttacgcgcttcctcaatctcctcagcaatttaaacag
cttcttatggtgtctggttttgataggtattttcagatagcgccatgctttcgtgacgaa
gacccgagggcagataggtctcctggagagttttatcagttggacatagagatggcgttt
gcaactcaaagtgagatatttgaagtgattgagccagttttgcgctctgtgttttgtgag
tttggtggaggggctagcgtcacaaatataccttttccaaaaataacatatgaagatgcg
atgctgctgtatgggtgcgacaagcctgacctgcgtaacccgcttgttatccgagacctc
acagaggaattttctagtaacccatgccccccattttctggagcaatttctggcggtggt
gttgtgagagctttggttatcaaagctgatatttggcaaaaaaactctctacaaaagagc
tttttccgatctttggcgcagtgggcagagcgcgagaaagctaaggggattggatatgtg
actgttgaagctctagatgtgagcgacgaagcgtcattttctggccctatagcaaagttt
ttgaatgaacgacataggggcaatattttttcaactcttgatcttggcgttggcgacaga
gttttatttatagcggacgaaaaaagcttggcagaatcaatctctgggaaaatgcgtata
cacttgggagaaactttgggactggttcgtgatggctcttttgagctgtgttggatcgtg
gactttccaatgtatgagcgagacaaagattccggagcggtgatattttctcacaacccg
ttttctatgcctcagggcggaatggacgcgctttgttcagaagaccctttaagtataaag
gcatatcaatacgatattgtgtgcaacggaatcgagctttccagcggtgctataagaaat
catgtgccagagataatgtacaaagcgtttgaaattgcggggtatggtaaggatcatgtg
gacgagcagttcggaggaatgatcagggcgtttcattatggcgcccctcctcatggagga
cttgctccaggtattgataggatgatcatgttactttctggagctaaaaatttaagagag
gtaatcgcgttcccgttcagtcagcaggttcgagacttgatgatggatgcgccatctgct
gtgtctgctgatagcttaaaagaattgcatatacgtgtggttcgctga
DBGET
integrated database retrieval system
