Candidatus Hydrogenosomobacter endosymbioticus: HYD_3850
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Entry
HYD_3850 CDS
T07863
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hec03016
]
HYD_3850 (truB)
Enzymes [BR:
hec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HYD_3850 (truB)
Transfer RNA biogenesis [BR:
hec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HYD_3850 (truB)
Prokaryotic type
HYD_3850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BDB96252
LinkDB
All DBs
Position
complement(440017..440901)
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AA seq
294 aa
AA seq
DB search
MDGWAVIDKSCGITSMRVTSRVKKIIKEIVGKKVRAGHAGTLDPFATGVLPVAFGRATSL
IPILMSQSKEYEFTLSFGAKTSTGDCYGDEEERNCYIPRESEIVSVIRGFIGEIDQTPPS
FSAIKIRGVPAYKLARKKEVFEILPRKVRIFELEFLDMKTVDSADFRVKCASGTYIRSLG
EDIARALNTCGHLSQLRRTRVGPFSCELATSIDFFQEMMYKGDRGFLFSLCAGLGDIPVC
AVTAEERSRLWHGLPVLKGNSCSGDGRVACMCDNMLVALCDRDGEEIVPKRCFL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatggatgggctgtaatagacaaaagttgcggaataacttctatgcgtgtgacgtct
agggttaaaaagatcatcaaagaaattgttggaaaaaaagtgcgagcaggtcatgctgga
acgcttgatccgttcgctacaggtgttttgccagttgcttttgggcgggctacgagcctt
attcctattcttatgtctcaaagcaaagagtatgagtttacgttatcatttggagcgaag
acctctactggtgattgctatggagatgaagaggaaaggaattgctatattccaagagag
tccgaaatcgtatctgtgattagaggctttataggagagatagaccaaactccgccgtca
tttagcgcgataaaaattcgtggggttccagcatataaattggctagaaaaaaagaggtt
tttgaaatcttgccaagaaaggttcgaatatttgagcttgaatttttagatatgaaaacg
gttgattccgcagattttagggtaaaatgtgcaagcggaacatatattcgttcgctcgga
gaagatatagctagggccctaaacacgtgcggccatttgtctcagcttagaagaactagg
gtaggtcctttcagttgtgagctcgcgacaagtatagatttttttcaggaaatgatgtat
aagggcgatagaggctttttgttttctttgtgtgctgggctgggcgacatcccggtttgc
gctgtgacagcagaggaacgaagcaggctgtggcacggattgccggtgttgaagggaaat
agttgttctggggacggcagagtcgcctgtatgtgcgacaatatgctggttgcgttatgt
gatcgcgacggtgaggagattgttcctaagaggtgttttttgtga
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