Candidatus Hydrogenosomobacter endosymbioticus: HYD_5440
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Entry
HYD_5440 CDS
T07863
Symbol
hofC
Name
(GenBank) type IV pilin biogenesis protein
KO
K02653
type IV pilus assembly protein PilC
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HYD_5440 (hofC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hec02044
]
HYD_5440 (hofC)
02035 Bacterial motility proteins [BR:
hec02035
]
HYD_5440 (hofC)
Secretion system [BR:
hec02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HYD_5440 (hofC)
Bacterial motility proteins [BR:
hec02035
]
Pilus system
Pilus assembly proteins
HYD_5440 (hofC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
FtsK_gamma
Motif
Other DBs
NCBI-ProteinID:
BDB96411
UniProt:
A0ABM7VA90
LinkDB
All DBs
Position
629356..630552
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AA seq
398 aa
AA seq
DB search
MALYKYQALDERGQLLWGYINGSTHDDAFNKLVNRKLDPIVVFKKFDLFGILRSKSAAED
IERFFMYLEYSLDAGVSITQSLRNIAPSFNKGFQAIVLSIQDDIYHGQMLSKACESFPFI
FHPITLSLIKIGEQSGKLSDSCRKIQEYLKLQRERRSKIAKALRYPIFSFVSFIMAAVFF
VTFFLPDLMQFFAAYNIQPSFCTALLVCIVEFPILMSLEMLLLLVAFLLAIYILFKPQSG
IFFGKVFFSFFPFAKIIADAHYSRFLQSLSILCGEHMRLVEAIVISKDTVSSSFIRRQLD
VVYENVISGRHLYEALGEALLFRPFYARIIQTGEETGRISQALYSAYEVSYRDTESTVSK
IIALAEPTLLIVIGAMFLFLVNATIVPLYEHLGAMSYE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtataaataccaggcgcttgacgaaagaggccagttattgtgggggtatatc
aacggttctacacatgacgatgcttttaataagcttgtgaaccgtaaacttgatccaata
gtagtgtttaaaaaatttgatttattcggaattttacgttctaagagcgctgcggaggat
atagaaagattctttatgtaccttgaatactccctagatgcaggagtttctattactcag
tctcttagaaatattgcgccttcttttaacaaagggtttcaggcgatagtccttagcata
caagatgatatttaccatggacaaatgctttcgaaagcatgcgaaagttttccgttcata
tttcatccaataacgctttctcttataaaaataggagaacaatctggtaaattgtctgat
tcatgtagaaaaatccaagaatatctgaaacttcaaagagagagaaggtctaagatagcg
aaagcgttgaggtatcctatctttagttttgtctcattcattatggctgcggtatttttt
gtaacattttttcttccggatttgatgcaatttttcgctgcgtacaatatacaaccatca
ttttgtacagctctattggtatgtatagttgaatttcctatattgatgtcgttggaaatg
ttgctgttattagtggcttttttactggctatttatattttgtttaagcctcaatccggg
atttttttcggaaaagtgtttttttcttttttcccgtttgcgaaaataattgctgatgcg
cattattcaagatttctccagtcattaagcatactttgcggtgagcatatgcgtctcgtc
gaagcgatagttatatccaaggacaccgtttcgtctagctttataagacggcagctcgac
gtggtgtacgagaacgtgatttccgggcgtcatttatacgaggctcttggtgaggcgtta
ctttttagaccattttatgcgcgcataattcagacaggtgaagaaactgggagaatatct
caggccctttacagcgcatacgaagtttcgtacagagatacggagtctaccgtatcgaaa
atcatagctctcgcagaaccaactctattaatagtgataggcgcgatgtttttgttttta
gtaaacgcaactatagttccgttgtacgaacatcttggggctatgagctatgaatag
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