Candidatus Hydrogenosomobacter endosymbioticus: HYD_5500
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Entry
HYD_5500 CDS
T07863
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec03420
Nucleotide excision repair
hec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYD_5500
03430 Mismatch repair
HYD_5500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hec03400
]
HYD_5500
Enzymes [BR:
hec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYD_5500
DNA repair and recombination proteins [BR:
hec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYD_5500
MMR (mismatch excision repair)
Other MMR factors
HYD_5500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BDB96417
LinkDB
All DBs
Position
634107..636338
Genome browser
AA seq
743 aa
AA seq
DB search
MKEFLSDMTSGDALNPQQEEAVNAIDGPVLVSAAAGTGKTKVLTVRFSRIIEQEKAHPWN
ILAVTFTNKAANEMKERVSSVVSVPVNNLWIGTFHSISLRILRKHHALCDRTASFSVIDT
GDQLSIVRKILKSLGMEKKVSPQVVVARINDIKQGMFGFKPNLIDAETMKIYNEYKSNIK
SMDAFDFADLINEAIFLFKKYPEILDEYSNQFKYILVDEYQDVNNVQHEWIKMLSGAHGN
VCCVGDDDQSIYGWRGANIENILRFGDDFPNAKIIRLEQNYRSTAHILSAASGVISHNKR
RYGKVLKTDNGTGEKVYVYGLSDSGDEAKFISRRAEELNKSGKAFSSMAILVRATFQTRE
FEERFMMDGVPYKIVGNSRFYERQEVKDFLAYIRVIFSSYDNVAFERVLCAPRRGIGDAT
IEALYAVASQSSASLYNAAEIAIGDKSDVEGIRNSTKIRLRTLISSIKRWQDMAGKKTPI
EVAENILAESGLVEMWAEQDNPKHGTKLDNVRDLIKTMEKFSSIREFLEHTSLLLETGED
SVSDSISVMTLHAAKGLEFDVVFLPGWEEGVFPNMRCIEELGNKGLEEERRLAYVGITRA
RQKAIICFCWSRRLPQGWTSSSPSRFIEEIPAENVIISLNQQYQQSVQQKERGQGLSYEW
ANMFGKKSYKEYCASSQPEKLNNGYKEEKLERYTRKSAFSVGQRVRHPLFGKGSVCSSSA
DTVFVEFENGMAKRISAGFLVKE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagtttttatccgatatgacttcaggggatgcgctgaatccgcaacaagaagaa
gcggttaacgctatcgatggccctgttttggtttcagccgccgcaggaactggcaagaca
aaggttttaactgtgaggttttctaggataatagagcaagaaaaagctcatccttggaat
attctagctgtaacattcacaaataaagctgcaaacgagatgaaagagagggtgtcttcc
gttgtctcagttcctgtgaataatctttggataggaacttttcatagcataagccttaga
attttgcgtaagcatcatgctctttgcgacaggacggcgtcgttctctgttattgacacc
ggcgatcaactcagtatagtgcgcaagatacttaaatctcttggtatggaaaaaaaagtt
tcccctcaggtagttgttgcgcgtataaacgatataaaacaaggaatgtttggctttaag
cctaaccttattgatgctgagacgatgaaaatttacaacgaatataaatcgaatattaag
tcgatggatgcatttgatttcgcagatctaataaatgaagcaatatttctattcaaaaaa
tacccggagatacttgatgaatatagtaatcaatttaaatacatccttgtggatgagtat
caggatgtaaacaacgtacagcatgagtggataaaaatgctttcgggtgcgcatggtaac
gtttgttgtgtgggagatgacgatcagtctatatatggctggcgaggcgctaatatagag
aatattttgcgttttggagacgatttccctaatgcgaagataatacgtcttgagcaaaat
tatcggtcaactgcgcacatactatcggcagcgagcggagtaatctcgcacaataagcgc
cgttatgggaaggttctgaaaaccgataacggaactggtgaaaaagtgtatgtgtatggc
ctttctgacagcggagatgaggcaaagtttatatctcgcagggcggaagagctaaataaa
tccggaaaagcattttcttcaatggcgatattggtgagagcaacttttcagactcgggaa
tttgaagagcgctttatgatggacggtgtgccatataaaatcgttggcaactctcgattt
tatgagcgtcaagaggttaaagactttctcgcatacatacgcgtgatattttcgtcatat
gataatgtggcgtttgaaagagtgctatgcgctccgaggcgaggtattggagatgccacg
atagaggcgctatatgccgtggcctctcagtcgtctgcgtctctttataacgcggcggaa
attgctataggagacaaaagcgatgttgagggaatcaggaatagcacgaaaataaggcta
agaactcttatttcaagtataaaaaggtggcaagacatggcgggtaaaaaaactcctata
gaagttgcggaaaatatacttgcagagtctgggctcgtggaaatgtgggcagaacaggat
aatccgaagcatggaacaaaactcgataatgttcgagacctcataaaaactatggaaaaa
ttttccagcataagggagtttcttgagcatacaagcttgcttcttgaaacgggagaagat
tctgttagcgatagcatatcagttatgactcttcatgcagcgaaagggttggagtttgat
gttgtatttcttccaggctgggaagagggagtttttccaaatatgcgttgcattgaagag
ctgggcaataaagggttggaagaggaacgaaggcttgcatatgttggtataacgagagct
cgccaaaaagccataatatgcttttgctggagcagaagattgccgcaaggatggacatct
tcatctccttcaaggttcatagaagaaattcctgctgaaaatgttataatttctctaaat
cagcaataccagcaaagcgtccaacagaaagaacggggacaggggctttcttacgaatgg
gccaatatgtttggaaaaaaaagttataaggaatattgcgcctcttctcagccagaaaag
ctaaacaatggttacaaagaagaaaaattagagagatatactagaaagtcggcattttct
gttgggcaaagggttaggcatccgttatttggtaaggggtctgtatgctcttcttcagcg
gacacggtttttgtggagtttgaaaatggaatggcaaaaaggataagtgcggggttttta
gtaaaagaatag
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