Candidatus Hydrogenosomobacter endosymbioticus: HYD_6880
Help
Entry
HYD_6880 CDS
T07863
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec00540
Lipopolysaccharide biosynthesis
hec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HYD_6880 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hec01005
]
HYD_6880 (kdtA)
Enzymes [BR:
hec01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HYD_6880 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HYD_6880 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
HYD_6880 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
HYD_6880 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
hec01005
]
Lipid A
HYD_6880 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
BDB96555
LinkDB
All DBs
Position
784327..785490
Genome browser
AA seq
387 aa
AA seq
DB search
MGFGNRGIPPSSVWIHGASIGEVRASFVIIDKISKTSEKTHILVTFQTFGAEETLKKHIR
ESGLEKRVSIRMVPIDVPLCVGAFLRATRPVAAIFIESEFWPALLLGLKRYKIPAVLVNG
NLSNKSFEAWRMAGDALSILCSVFKACFVSSESAFEKISSIAGAEVFRSPSIKCAANRLS
ASAELVSALRESIAERQFLLATCIHAEEEALVLDSFKRLRETMPKLILIIAPRHIERAHI
ICEMCSKIGLKSVLRSTVGFSIGESDVYVIDTFGELGIFYEVANFALLGGSFSSAEGHNI
LEPAMMRCAVVQGNRIKSQEEISDEFISEGACVCCGSYEMLSLELLRLLQNPYIASSMAE
KSFVIAERLHKNSQKLANEIMDILNVS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggatttggaaatcgcggtatacctccttcgagcgtgtggatacatggagcaagcata
ggtgaagtgcgtgcatctttcgtcataatagacaaaatatctaaaacttctgaaaaaacc
catatattagtgacatttcagacttttggcgcagaagaaacattaaaaaaacacatccgg
gaaagtgggttagaaaaaagggttagcataagaatggttcctatagatgttccattgtgt
gttggcgcgtttcttagggctactcgtcctgtggccgctatattcatagaatctgaattt
tggcctgctcttttgctagggctgaagaggtataaaattcctgcggttcttgtgaatgga
aatttatcgaacaaaagctttgaagcgtggagaatggctggagacgcgcttagtatattg
tgttctgtatttaaagcatgctttgtgtcgtctgaatctgcgtttgaaaaaatatcaagc
atagcgggcgcagaggtatttcgatctccatctataaaatgcgctgcaaacagactttct
gcttccgctgaacttgtgagcgctttaagagaaagcatagcagaaagacaatttctgctg
gcaacatgtatacatgcggaagaagaagcgctggttttggacagttttaagcgtctgcgc
gagacaatgccaaagctgattcttatcatagctcctcgtcatatagaaagagcgcatatc
atttgtgaaatgtgttcaaaaattggtctaaaatctgttttgcggtcaacggttggattt
tctattggcgaaagtgatgtgtatgttatcgacacatttggagagctaggcatattttat
gaagtggctaatttcgcacttcttggagggtctttttcttctgctgaaggacataatata
cttgagcctgcaatgatgagatgtgcggttgttcaaggaaacaggataaagagccaggaa
gaaatttctgatgagtttatttctgaaggagcctgcgtttgttgcggaagctatgagatg
ctctcattagaattattacgcctgctgcaaaatccgtatatagcgtcatcaatggcagaa
aaatcttttgttatagctgaaaggctgcataaaaattcgcaaaaattagcaaatgaaatt
atggacattttgaatgtgagttaa
DBGET
integrated database retrieval system
