Candidatus Hydrogenosomobacter endosymbioticus: HYD_6890
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Entry
HYD_6890 CDS
T07863
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hec03032
]
HYD_6890 (gyrB)
03400 DNA repair and recombination proteins [BR:
hec03400
]
HYD_6890 (gyrB)
Enzymes [BR:
hec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYD_6890 (gyrB)
DNA replication proteins [BR:
hec03032
]
Prokaryotic type
DNA Topoisomerases
HYD_6890 (gyrB)
DNA repair and recombination proteins [BR:
hec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYD_6890 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
ALOG_dom
Motif
Other DBs
NCBI-ProteinID:
BDB96556
LinkDB
All DBs
Position
785619..788015
Genome browser
AA seq
798 aa
AA seq
DB search
MSNKNNYDSRSIKVLRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNSIDESLAGHCDH
IKIVLRSDGAVSVTDNGRGIPVDIHEEEGISAAEVIMTHLHAGGKFDQNSYKVSGGLHGV
GVSVVNALSSWLTLRIWRDGGEYFIKFEDGVPTKSLEKISECEKGRHGTEVVFFPSSSTF
SGIDFDFSVIERRMKELAFLNPKLSISVVDERESPHKKVDMKYAGGVKSFVQYLDRGKTS
IHEEVISFFGEKNGICLDIAMEWTSSYHESVLCFTNNIPQKDGGTHLSGFRSALTRTISH
LLSASGRKEKSIVMGEDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVRPIIESIVSEKI
EQWMEENPSEMKKILSRIVESALAREAARKARELTRRKSALDIASLPGKLSDCSERDPSL
CELYLVEGDSAGGNAKSGRDRKFQAILPLRGKILNVERARFDKMLGSAEIGTLITALGTG
IGEDFNVSKLRYHKVILMTDADVDGSHIRTLLLTFFFRYMRELIYKKHLYIAQPPLYGIR
RGQSMIYMKNDRALNGYFIQSGSQVVSIISADGVQIAGVDLESHIQKAWQVASITDRMFF
KDFSLYILEMAIVSGALSDGRFYSDRESWAQDLLKFSNNNEKTGKWSIAKVDSGGATFIH
EFDGVSQSYSVSEQLMDSSEVLQLKSMEHDMRGLYPAKLIMLKDGSQRTVLRPSELWKAV
SDIVKKGIYIQRYKGLGEMQADQLWETTLDPNSRTLIQVSLRHAEEASELFSILMGDIVA
PRRSFIQENALNTINLDA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaataaaaataattacgattccaggtctataaaggtcctaagagggttggatgct
gttcggaagcgtcctggtatgtatataggagatacagatgacgggtctgggcttcatcac
atggtgtatgaagttgttgacaactctatagatgagtctttggctggtcactgcgatcac
ataaaaatagttcttcgttctgatggcgctgtttctgttacagacaatggaagagggatt
ccggttgatattcatgaggaagagggcatttctgctgctgaggttatcatgacacaccta
cacgctggcggaaagttcgatcaaaactcgtataaggtgtctggaggacttcatggtgtt
ggagtgtcggttgtaaatgccctatcatcatggcttactcttaggatatggcgcgacggg
ggtgagtattttataaaatttgaggatggagtcccaacaaaatctctagagaaaatatcg
gaatgcgaaaaaggaaggcatggcacggaagttgtgttttttccatcgagctctacgttt
tctggtatagatttcgatttttctgtgatagagcgccgcatgaaggagcttgcgttttta
aatccaaaactctctatatctgttgtcgacgagcgagaatctccgcataaaaaagtcgat
atgaaatatgctggaggggttaagtcgtttgttcagtacttggatcgcggaaagacatct
atacatgaagaggtaatcagcttttttggagaaaaaaacggaatttgtcttgatatagcg
atggagtggacgtctagctatcacgaaagcgtattgtgttttacgaataatattccgcaa
aaggatggtggaacgcatttatctggttttcgttcggccctcaccagaacaatttcgcac
cttttatcagcttccggtaggaaggaaaagtctattgttatgggggaagatgcaagagaa
gggttaacggccgttgtttcagtgaaagttcctgatcccaaattttcatcgcaaactaaa
gacaagcttgtctcgtctgaggtgcgtccaattatagaaagcatagtaagcgaaaagatt
gaacagtggatggaagaaaatccgagcgaaatgaagaaaattttgtcacgcatagtggag
tctgcgctcgcgagagaggcggccaggaaagctcgtgaacttacgcgacgcaaaagcgct
ctcgacatcgcatctcttccaggaaaactgtcggattgctccgagcgagatccttcgttg
tgcgagctatatttggtggaaggagatagcgctggtggaaatgctaagagcggtcgagac
agaaaatttcaagcgatacttccgctgcgcggcaaaattcttaacgtagagcgggcaagg
tttgataaaatgcttgggtctgcagaaattggtactttaataacggctcttggaaccggc
ataggcgaggactttaacgtatcgaagcttcgatatcataaagtaattcttatgacagat
gcagatgtggacgggagccatatacggacccttcttttaacattctttttccggtatatg
cgtgaactgatatataaaaagcacttgtatatagcgcagccacctctatatggtatacga
cgggggcaatccatgatttacatgaaaaatgatagggctctgaatgggtattttattcag
tctggctctcaagttgtttctataatttctgcggacggggtgcaaatagcaggcgtagac
ctagagagtcacatacaaaaagcatggcaggtggcttcaatcacagatcggatgtttttc
aaggatttctctctatacattttagagatggctattgttagcggagcattgagtgatggc
agattttattctgatagagaatcttgggcgcaggatttacttaaattttctaataacaat
gaaaaaactggaaagtggagcatagcaaaagtagattctgggggggcgacatttattcac
gaatttgacggagttagtcaaagttactctgtgtcagagcagcttatggattcttccgag
gtgcttcaattgaagtctatggagcacgatatgcgcggcttatatccggcgaagcttata
atgttgaaggacggaagccagagaacagtattgagaccatcagagctttggaaagctgtg
tctgatatagtgaaaaaaggaatatatatacaacgatataaaggtcttggagagatgcaa
gcagaccagctgtgggaaaccactctcgacccaaactctagaacgctgatacaagtttct
cttcgccatgcagaggaagccagcgagctgttctcgatattgatgggagacatagtcgct
ccaaggcgatcgtttatacaggaaaatgcactgaatacaataaatcttgatgcatag
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integrated database retrieval system
