Candidatus Hoaglandella endobia: TPER_HE00085
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Entry
TPER_HE00085 CDS
T04484
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hed
Candidatus Hoaglandella endobia
Pathway
hed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPER_HE00085 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hed03019
]
TPER_HE00085 (pnp)
03016 Transfer RNA biogenesis [BR:
hed03016
]
TPER_HE00085 (pnp)
Enzymes [BR:
hed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TPER_HE00085 (pnp)
Messenger RNA biogenesis [BR:
hed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPER_HE00085 (pnp)
Transfer RNA biogenesis [BR:
hed03016
]
Prokaryotic type
tRNA degradation factors
TPER_HE00085 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH_SLS1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CUX97036
UniProt:
A0A143WTV7
LinkDB
All DBs
Position
I:complement(83329..85413)
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AA seq
694 aa
AA seq
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MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKKEKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGEMLISRLIDRPIRPLFPEGFLNEVQVIAMVVSI
NSQVSPDIVAMIGASSALSLSGIPFSGPIGAARVGYINDQYVLNPTQTELASSRLDLVVA
GTANAVLMVESEAQLLNENQMLDAVMYGHEQQQVVIENIRQFVDEAGQPKWQLKPQEANA
SLHKLVAELAESRLGDAYRITEKQKRYLMVDAIKADIVEQLISQDDSIHEEKIQATLGNL
EKQVVRSRVLRGEPRIDGREKDMIRELDIRTGILPRTHGSALFTRGETQALVTATLGTER
DAQNLDELTGERTARFLLHYNFPPYCVGEIGIVGSPKRREVGHGRLAKRGLSAVMPNIVE
CPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLIKEGDSFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALYQAKEARMHILEVMNRA
ISMPRSDISPFAPRIYTIKINADKIKDLIGKGGSVIRTLTEETGTTIEIEDDGTVKVSAT
DSEKASHAIRRIEEITAKLEVGRVYNGKVIRIVDFGAFIAISGGKEGLVHISQIVDKHVE
KVADYLELGQKVPVKVLEVDRQGRIRLSIKEASS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatccaattgttcgcaagtttcaatacggtcagcataccgtaacgcttgaaacc
ggtatgatggcccgtcaggcgacggccgcagtcatggtaagcatggacgacaccgcagta
tttgttaccgtagttggcgctaaaaaagaaaaaccgggccagagtttctttccactaact
gtcaactatcaggaacgtacctacgccgccggtcgttttccaggtgggttctttcgacga
gaaggtcgtccaagcgaaggtgaaatgcttatttcacgcttgatcgaccggccgattcgt
ccgctgttcccagaaggttttttgaatgaagtacaggttatcgcgatggtggtatcgatt
aattcgcaagtcagcccagatattgtagcgatgatcggcgcatcttctgcgctaagcctg
tcaggtattccattcagtggacccatcggcgccgcacgtgtaggctatatcaacgaccaa
tatgtattaaaccctactcagactgagctagcttctagccggctagatctggtagttgct
ggtaccgctaacgcggtactgatggtggagtcggaagcacaactactgaacgaaaatcag
atgctggacgcagtgatgtatggccacgaacagcaacaagtggtaatcgagaacattagg
caatttgttgacgaagccggccagccaaaatggcaattgaagccacaggaagccaacgcc
tcattgcataaattggtcgctgaattagcggaaagccgtttgggggatgcctaccgcatt
actgagaagcaaaagcgttatcttatggttgatgctatcaaagctgatatagtagagcaa
ttaattagtcaagacgattccattcatgaagagaaaattcaagccaccctgggcaacttg
gagaaacaagttgtacgcagccgcgtgctgcgtggcgagccgcgtattgatggccgtgaa
aaagatatgattcgcgaactggatatacgcactggcatactaccgcgcacccatgggtcg
gcgctgttcacccgcggcgaaacccaggcgctggttacagccaccctcggcactgagcgc
gatgcacagaatcttgatgagctgacgggtgaacgtactgcccgttttctgctacactat
aacttcccgccatattgtgtaggtgaaattggtatagtgggttcaccgaagcggcgggaa
gttggccatggccgtctagctaaacgcgggttgtcagcagttatgccaaatatcgttgaa
tgcccttataccgtgcgggtagtatcggaaattaccgaatctaacggttcttcttctatg
gcttcagtttgcggtgcttcgctggcgctaatggatgctggggttccaattaaggcggcc
gtagccggtatcgccatggggctaataaaagaaggtgatagctttgtggtactatccgat
attctaggtgatgaagatcatctgggcgatatggatttcaaagtcgcaggaagccgcgaa
ggtatcacagcactgcagatggatattaaaattgaaggcattaccagagaaatcatgcag
gtagcgctttatcaggcaaaggaggcgcgtatgcatatactagaagtgatgaatcgagca
atcagcatgccgcgcagcgatatttccccattcgctccgcgtatttacacgatcaaaatt
aatgcagataaaattaaagacttgattggtaaaggcggctcggtgattcgcacgttaacc
gaagaaaccggtacgactattgaaattgaagacgacggcacagtaaaagtgtcagccact
gatagtgagaaagcttctcatgctattcgtcgtatcgaagagatcacagctaaactggaa
gtaggacgcgtttataatggaaaagtgatccgcatcgttgatttcggagcctttattgct
atcagcgggggtaaagaagggttagtacatatttctcaaattgtcgataagcatgtggaa
aaagtagccgattatctagaacttggacaaaaagtaccggttaaagttttggaagttgac
cgtcaagggcgcattcgcctgagcattaaggaagcgagctcctag
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