Candidatus Hoaglandella endobia: TPER_HE00091
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Entry
TPER_HE00091 CDS
T04484
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
hed
Candidatus Hoaglandella endobia
Brite
KEGG Orthology (KO) [BR:
hed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hed03021
]
TPER_HE00091
03009 Ribosome biogenesis [BR:
hed03009
]
TPER_HE00091
Transcription machinery [BR:
hed03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TPER_HE00091
Ribosome biogenesis [BR:
hed03009
]
Prokaryotic type
rRNA transcription factors
TPER_HE00091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
CUX97041
UniProt:
A0A143WT74
LinkDB
All DBs
Position
I:complement(90125..91612)
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AA seq
495 aa
AA seq
DB search
MNKEVLAVVEAVSNEKEVPRKKIFEALETALATATKKKYAQEIEVRVSIDRKSGDFETFR
RWLIVETVTQPTREITLEAAQFDDPSAELGNYIEDKIDSVVFDRITTQTAKQVIIQKVRE
AEREIIVDQFRSHEGEILTGVVKKVNRDSISLDLGNNAETVIGREDMLPRENFRPGDRIR
GVLYAVRPEVRGAQLFISRSRPEMLVELFRIEVPEIGEEIIEIKAVARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMVPADVASIVVDE
DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTLEDLQAKNQVEAYAVIDIFT
KNLDIDKDLATVLMEEGFSSLEELAYVPINELLEIDGLDEKTVEALRERAKNAITTLALA
QEESRHGGTPAEELLGLPELEREMAFKLAKHGVCTLEALAEQGIDELSDIEGLSSKKAGE
LIMAARNICWFSDNV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaagttctggctgttgttgaggcagtttccaacgaaaaagaagtaccgcga
aaaaaaatttttgaagcgttagagacagcactagctacggcaaccaagaaaaaatatgca
caggaaatcgaagtacgcgttagcatcgatcgcaaatcaggagatttcgagacctttcga
cgttggcttatcgtggaaactgttacgcagcctacccgtgaaatcactctagaagcggcg
cagtttgacgatccatcggccgaacttggcaactatatcgaagataaaatcgactcagtg
gttttcgaccgtatcaccactcagaccgccaaacaggtcatcatacaaaaagtccgtgaa
gccgagcgagagattatagtcgatcaattccgtagtcacgaaggcgaaatcttgactggt
gttgtaaaaaaagttaaccgagatagcatcagccttgatctgggcaataatgccgaaacg
gtgattggccgtgaggacatgctcccgcgtgaaaattttcgtcctggcgaccgaatccgt
ggcgttttatatgctgtgcgtccagaagtacgcggtgcgcaactatttatcagccgttct
cgtcctgaaatgctggttgagctgttccgtattgaagtgccggaaatcggcgaagaaatc
attgaaatcaaggcagttgctcgtgatcctggttcacgggcaaaaattgctgtaaaaacc
aacgataaacgtatcgatccagtcggtgcctgcgtcggtatgcgcggtgcccgagtgcag
gctgtgtctagcgaattaggcggggaacgtattgatatcgtgctgtgggacgataatcca
gcccagtttgtaatcaacgccatggtgcctgctgatgttgcttccatcgtagtggacgaa
gataagcacaccatggatatcgcggttgaagctggtaatcttgctcaggctatcggccgc
aatggacaaaacgtccggttggcttcccagcttagcggctgggagctaaatgttatgaca
ttagaggatctacaggcaaaaaatcaagtcgaagcctatgcggttatcgatatctttact
aaaaacctagatatcgataaagatttggccacggtcttgatggaagaaggtttctcctct
cttgaggagctagcttacgtgcctatcaatgagctgctggaaattgacgggctggatgag
aagactgtagaagcactacgtgaacgggcaaagaatgcgattaccacccttgctctggca
caggaagagagtcgccacgggggcacgccagctgaagaattgctaggtctgcctgagctt
gaacgcgaaatggcatttaagctggcgaagcatggtgtttgtacgctagaagcgctggcc
gaacagggtatcgatgaactgtcagatattgaagggctcagtagtaaaaaggctggggag
ctgattatggccgcacgcaatatttgttggtttagcgacaacgtgtaa
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