Candidatus Hoaglandella endobia: TPER_HE00174
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Entry
TPER_HE00174 CDS
T04484
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hed
Candidatus Hoaglandella endobia
Pathway
hed03420
Nucleotide excision repair
hed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPER_HE00174 (uvrD)
03430 Mismatch repair
TPER_HE00174 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hed03400
]
TPER_HE00174 (uvrD)
Enzymes [BR:
hed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPER_HE00174 (uvrD)
DNA repair and recombination proteins [BR:
hed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPER_HE00174 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TPER_HE00174 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Cas3_C
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
CUX97115
UniProt:
A0A143WTS8
LinkDB
All DBs
Position
I:complement(166024..168126)
Genome browser
AA seq
700 aa
AA seq
DB search
MEVSSLLKSLNYKQRKAVVAPAGNLLVLAGAGSGKTRVLVHRIAWLLLVAKCSPYSVIGV
TFTNKAAAEMSARIKHLVGNSQKGMWIGTFHGLAHRLLRLHHMDANLPHDFQILDSEDQL
RLLKRLIRAMNMDEAQWSSRQAMLYIGVKKDEGLRPQHIESYGNPVEASWQRIYQAYQDT
CDRAGLVDFAELLLRTHELWLNKPHILSHYRERFSNILVDEFQDTNQIQYAWIRMLAGGN
KNNVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAQTIILEQNYRSTSNILHAANALISH
NGYRLGKNLWTEDTEGEPITLYSAVNELDEALFVVNRIKLHHNNGGVLKDCAILYRSNTQ
SRVLEEALLQMGLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNMPTRGIG
ERTMEVVRQTANNKQLTLWQASRWLLTEHVFTGRAAYSLQSFLDLIEALAEETAELPLHL
TTDIVIKNSGLWSIYEQEKGEKGQARIENLEELVTATRQFSYNDNEEDQDLLPLQSFLSH
AALEAGAGQADEYQDAVQLMTLHSAKGLEFPQVFIVGMEEGLFPRQMSINESGRLEEERR
LAYVGVTRSMKKLTITYAETRRIYGKETYNQPSRFIGELPLSCVQKVPSSSNFTSAARQR
RSDVLLNNNNSGGFTLGQRVRHPNPKFGEGTVVKLEGSDD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttcttctttgctcaagagcttaaactacaagcagcgcaaagctgtggtggca
ccggctggcaatttactagtgctagctggcgctggcagcggcaaaaccagagtgttggtg
catcgtattgcttggcttttgttggtggcaaaatgctctccctattctgtaataggggta
acattcactaacaaggcggcggcagagatgtctgcccgtatcaagcacctggtaggcaac
agccaaaaaggaatgtggataggcacgtttcatggtcttgctcaccgcctgctgcgctta
catcatatggacgctaatctaccacatgattttcaaattctcgatagtgaggatcagtta
cgcctacttaagcgactaattcgcgccatgaatatggatgaagcacagtggtcatcgcgc
caggcgatgttatatattggcgtaaaaaaagatgaaggattgcgtccacagcacattgaa
agttacggtaatccggtcgaggctagctggcagcgtatttatcaggcttatcaggacacc
tgcgatcgtgccggactggttgattttgccgagttgctgctacgcacccatgagctgtgg
ttgaataaaccacatatattaagccactatcgcgaacgtttttccaatattctggtagat
gaatttcaggataccaaccagatccaatacgcatggatccgcatgttagctggtggtaat
aaaaacaatgtaatgatagtcggcgacgatgaccaatctatttacggttggcgcggtgca
caagtagaaaacattcagcgcttccttgatgattttcctggtgcgcagacaattatccta
gagcaaaactatcgttctactagtaatattttacatgcagcaaacgcccttatctcccat
aatggttacagacttggtaaaaatttatggactgaagatacggaaggagaacctattacg
ctgtacagcgcggtcaatgaactagatgaagcgctgtttgtggtcaaccgcattaaattg
caccataataatggcggcgtgctcaaggactgcgccattctttatcgcagcaatacccag
tcgcgtgtgctagaagaagcgctgctgcagatgggtttgccttatcgcatctatgggggt
atgcgttttttcgaacgacaggaaataaaggatgcactagcctatttacggcttattgcc
aaccgcaacgacgatgccgcctatgaacgggtggttaatatgcctacacgcggtataggc
gagcgcactatggaagtcgtacgccagaccgccaataataagcaattaacgctgtggcag
gcaagccggtggctgcttacagaacatgtatttaccggccgcgctgcctactcgttacaa
agttttctggaccttattgaggcgctagctgaggaaacagcagaactaccgctacattta
acaaccgatatagttattaaaaactctggtctttggagcatatacgagcaggaaaaagga
gaaaaaggacaggcgcgcattgaaaacttggaggagcttgtcacagccacccgccagttt
agctataatgacaatgaagaagatcaagatttgctgccgctacagtcgtttttgtcgcat
gctgccctggaagccggcgcagggcaagctgacgaatatcaagacgcggtgcaacttatg
actctacactcagccaaaggattggagtttccccaggtgtttatcgttggaatggaagag
ggtctgtttccccgtcagatgtcaattaatgaaagcgggaggctggaagaggaacgcaga
ctggcgtatgttggcgtcacccgctcgatgaaaaagctgacaataacttatgccgaaacg
cgccggatatacggaaaagagacatataatcagccatcgcgatttatcggggaattacca
ctttcatgcgtacaaaaagtaccttcaagtagtaacttcactagtgcagcaagacaaaga
cgcagcgatgttctactaaacaataataacagcggtggttttactctcggtcagcgagtg
cgtcatccaaatccaaaatttggtgaagggacggtagttaagttagagggtagcgacgat
taa
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