Candidatus Hoaglandella endobia: TPER_HE00182
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Entry
TPER_HE00182 CDS
T04484
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hed
Candidatus Hoaglandella endobia
Brite
KEGG Orthology (KO) [BR:
hed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hed03032
]
TPER_HE00182 (gyrB)
03400 DNA repair and recombination proteins [BR:
hed03400
]
TPER_HE00182 (gyrB)
Enzymes [BR:
hed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TPER_HE00182 (gyrB)
DNA replication proteins [BR:
hed03032
]
Prokaryotic type
DNA Topoisomerases
TPER_HE00182 (gyrB)
DNA repair and recombination proteins [BR:
hed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TPER_HE00182 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
DUF2526
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CUX97123
UniProt:
A0A143WTM9
LinkDB
All DBs
Position
I:175471..177882
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AA seq
803 aa
AA seq
DB search
MSNFYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAVDESLAGHCNEIL
ITIHEDNSVSVQDNGRGIPTGLHEDEGVSAAEVIMTVLHAGGKFDDNAYKVAGGLHGVGI
SVVNALSEKLELMIKREGKLHYQTYHDGVPQSPLKVLGKTNQTGTTVHFWPSLTIFTNHT
EFQYEILAKRLRELSFLNSCLSIRLHDKRNNKKDYFHYEGGIQAFVAYLNKNKSPIHPNI
FYFCTEKDNVGVEIALQWNEGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLHSYMDKE
GYSKKIKVSATGDDAREGLVAVVSIKVADPKFSSQTKEKLVSSEVKSAVESLMNERMIEY
LLEKPNDAKIVVGKIIAAARAREAARKAREITRRKETLDIAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKASFDKMLSSQEVATLITALGCGIGR
NEYNPDKLRYHNIIIMTDADVDGAHIRTLLLTFFYRQMPEIIKRGHVFIAQPPLYKVKKG
TQEKYIKDNKAMDLYQIALAMDGAILHTNSQYLAGKRLENLVNEYYAVQNIIDCMERRYP
RALLNQLIYQPTLTKRQLTQQEQVINWMASLVAALNDKDNKPGSSYHYKVQENCERKIFE
PLLQVRTNGVDNYYLLDYTFISGSQYRKLVALGEKLSGIIDTATYIERGERCQSVTSFEQ
ALEWLLKESSRGLAVQRYKGLGEMNPEQLWETTMNPNNRRMLQVTVKDAIAADQLFTTLM
GDAVEPRRAFIEENSLKAANIDI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttttatgactcctcaagtattaaagtcctcaaaggactggatgcggtgcgc
aagcgcccgggtatgtatatcggcgataccgatgatggtaccggtctacatcatatggta
tttgaggttgtagataacgctgttgatgaatcccttgcaggtcactgtaatgaaatcttg
atcactattcacgaagacaattctgtttcggtacaagataacggccgtggtattccgaca
ggtcttcatgaagatgagggtgtctctgcagctgaagtaatcatgaccgtgttacatgcg
ggcggtaagtttgacgataacgcctataaagtagctggggggctgcatggtgtcggtatc
tcagtagttaacgcactgtcagaaaaacttgagctgatgattaaaagagaaggtaaattg
cattaccagacctatcatgatggtgtgccgcaatcgccgttaaaagtcttgggaaaaacc
aatcaaactggcaccaccgtgcacttctggcctagcttaactatctttactaatcacacc
gaattccaatatgaaattctagccaagcggctacgggaactatcttttttgaattcttgc
ttgtctatacgactgcacgataagcgtaacaataagaaagattactttcattatgaaggt
ggtattcaagctttcgtagcatatctgaataaaaataaaagccccattcatccaaatata
ttctatttttgcactgaaaaagacaatgttggtgtagaaatagcgcttcaatggaatgaa
ggttttcaagaaaatatctactgttttactaacaatatccctcaaagggatgggggtacc
catttagctggtttccgcgcagccatgacccgtactttgcattcctatatggataaggaa
ggatacagtaagaagattaaggttagcgcgaccggcgatgacgcccgcgaggggctggtg
gctgtcgtgtcaataaaagtagcagatccaaaattttcttcccaaactaaagaaaaactg
gtgtcttctgaagtaaaatctgctgtagagtcgctgatgaacgagcgaatgatagagtat
ttgctagaaaagcctaacgatgccaaaattgtggtaggcaaaattatcgctgcagcgcgc
gcacgcgaagctgcgcgcaaggcacgggaaattacacggcggaaagaaacactggatata
gcaggtttgcctggtaagttagcagactgtcaggaacgcgacccagcactttctgaacta
tatttggtcgaaggagattctgccggtggatcagctaaacaaggtcgtaaccgtaaaaat
caggccattttaccactaaaaggaaaaattcttaacgtcgagaaagcgagtttcgataag
atgctgtcttcgcaggaagttgcaaccttaataactgctctcggttgcggtatcggccgt
aatgaatacaacccggataaacttcgttatcacaatattataattatgactgatgccgat
gttgatggcgcgcatattcgcactttgctattgacgtttttctatcgtcagatgccagaa
attattaaacgtggtcatgtttttattgcccagccgcctttatataaagtaaaaaaaggt
acccaagaaaaatatattaaagataacaaagccatggacctatatcagatagcgttagcg
atggatggcgcgatactgcatactaattctcaatatctggccggcaaacgactggaaaac
ctggttaacgagtattatgccgtacaaaatataatagattgcatggagcgacgttatccc
cgtgcgttgctcaatcagctaatttaccagccgacgttaactaaaaggcaattaactcag
caagaacaggtaataaactggatggcttcattggtcgcagcgcttaacgataaagataat
aagcccggtagtagctaccactacaaggtgcaagaaaattgtgaacgtaagatatttgag
ccgttgttgcaagtacggactaacggcgtagataactactatctgctagattatacattc
atctccggcagtcaatatcgaaaactggtagcattaggtgaaaagcttagcggtatcata
gatacggctacctatattgagcgcggtgagcgctgccagtcagtcactagctttgagcag
gcgttggagtggttattaaaagaatcaagccgcggtctggcggtgcagcgctataaaggg
ttaggtgaaatgaatccagagcaattgtgggaaacaaccatgaacccaaacaatcgccgc
atgttgcaggtcacagtaaaggatgccattgccgcagatcagctgtttactactctcatg
ggagatgcggtagaacctcgccgagcttttattgaagaaaactcgttgaaggcggcaaat
atcgatatttaa
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