Candidatus Hoaglandella endobia: TPER_HE00337
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Entry
TPER_HE00337 CDS
T04484
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hed
Candidatus Hoaglandella endobia
Pathway
hed03030
DNA replication
hed03430
Mismatch repair
hed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPER_HE00337 (dnaE)
03430 Mismatch repair
TPER_HE00337 (dnaE)
03440 Homologous recombination
TPER_HE00337 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hed03032
]
TPER_HE00337 (dnaE)
03400 DNA repair and recombination proteins [BR:
hed03400
]
TPER_HE00337 (dnaE)
Enzymes [BR:
hed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPER_HE00337 (dnaE)
DNA replication proteins [BR:
hed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPER_HE00337 (dnaE)
DNA repair and recombination proteins [BR:
hed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPER_HE00337 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
GHMP_kinases_C
Motif
Other DBs
NCBI-ProteinID:
CUX97257
UniProt:
A0A143WU38
LinkDB
All DBs
Position
I:complement(350188..353412)
Genome browser
AA seq
1074 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMRDGLAKVWTLVKKATALNMPALAITDFTNLCGLVKFYSAAHSA
GIKPIIGADFLVQSKMLGEELAELTILAANNVGYQNLTMLISQAYKRGYGDVGPVIDRDW
LISHREGLILLSGARKGDVGKYLMRGNMFQVEQCLEFYQSYFSDCYYLELIRTGRTDEES
YLHAAVELAARHNLPLVATNDVRFMIPDDFDAHEIRVAIHNGFTLYDDKRPRHYSAQQYM
RSETEMVELFTGLPEALANSVEIARRCNVSIRLGEYFLPKFPTGKMSTADYLIKCARDGL
EERLTFLFSDADERREKRLPYYERLENELQVINQIGFPSYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERLSMPDFDVDFCMEKRDLVIDHVAE
TYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYSFIDRISKLVPPDPGMTLEKAFAAEPQ
LQALYSSDEEIKALIDMARKLEGVTRNVGKHAGGVVIAPTKITDFSPIYCDSEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINLRRERYRLAPIDIAAIPLNDQKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSSMVNNFIDRKHGREA
ISYPDIEWQHESLQPVLESTYGIILYQEQVMQIAQVLAGYTLGGADILRRAMGKKKPEEM
AKQRSVFKAGAQRIGIDGKLAIKIFDLLEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKMVGLVDECLRMGIKVLPPDINIGQYHFHVNDEGEIVYGIGAIKG
VGKGPIEAMIEARNNDGPFLELFNLCARTNIKKLNRRVLEKLIMSGAFDRLGPHRAAMMN
SLSKALKAAEQHTKAKAIGQGDMFGVLADKPEAVEASYSTVSPWPEQVLLDGECETLGQY
LTGHPITQYLHEIERYTDGVRLKDMQPTERGKMATAGGLVLSARVTVTKHGNRIGVCTLD
DQSGRLDVMLFKNALKKYQHLLKKYRILIAQGQISFDDFNGGLKMTACKLIDIS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgttttattcacttgcgcgtgcacagcgattactctatgagagatggt
ctggctaaagtatggacgctagtaaaaaaagctacggcactgaacatgccggcactagcg
attacagattttacaaatctttgcggtttagttaaattttatagcgctgctcatagcgcc
ggcatcaaacctattattggcgccgattttctagtacaaagcaagatgctgggggaagag
ctagcagaactaactattttagctgccaataacgttggctaccaaaatttaacgatgctc
atttcacaggcctataagcgtggttatggagatgttggtccagttattgatcgtgactgg
ctgatcagccatcgcgaaggcttaattttactctctggcgcacgcaaaggagacgtaggc
aaatacttaatgcgtggcaatatgtttcaggtagagcagtgcctggagttttatcaaagc
tatttttccgactgctattatcttgagctcattcgcaccggacggacggatgaagagagc
tatttacatgctgcggtggaactagcagcgcggcataatttaccattggtagctacaaac
gatgtacgattcatgataccggatgattttgatgctcatgaaattcgcgtggctatccat
aatggatttactctgtatgacgataaaaggccacgtcattacagtgcgcagcaatatatg
cgcagcgaaacggagatggtcgagctgtttaccggcctgcctgaagccttggcaaacagc
gtagaaatcgccaggcgctgcaatgtcagcatccgcctcggcgagtattttctaccgaag
tttccgactggaaagatgtctaccgcggattatcttatcaaatgcgcccgcgacggcttg
gaagaacggcttactttcttgttctccgatgctgatgagcgacgggaaaaacgtctccct
tattatgaacgcctagaaaacgaacttcaagtcatcaatcagattggctttcctagctat
ttcctgatagtgatggagtttatccaatggtctaaggacaacggagttccggtaggacca
ggacgcggatcaggagctggatcgctagtagcctatgcacttaaaatcacagatctcgat
ccgctagcattcgatctgctttttgaacgtttcctaaacccggaacgcctgtcgatgcca
gatttcgatgtggacttctgtatggagaaacgcgatctagttattgatcatgtggccgag
acctatggccgcgacgcggtttcgcaaattataacgtttggtactatggcagctaaagcg
gtaatccgtgatgtaggccgcgtgttgggccatccttatagttttatcgatcgcatttcc
aagctggtaccgcctgatcctggcatgactctagaaaaagccttcgctgctgagccgcag
ctgcaggcactctatagttccgacgaggagatcaaagcgctaattgatatggcgcgtaaa
ctcgaaggagtgacacgtaacgtgggcaagcatgctggaggcgtagtaattgcgcccacc
aaaattactgatttctctccaatttattgtgattctgaaggaaatcatccggttacccag
tttgataaaaacgatgtggaatatgcgggcctggtcaagtttgactttcttggtttgcgc
accttaactatcattaactgggcgctggaaatgattaacctccggcgcgagcgctatagg
ttggcgcctatcgatatcgccgcaataccgttaaatgatcagaaaagttttgatatgcta
cagcgctccgaaactacagcggtatttcagttagaatcgcgggggatgaaggatttaatc
aagcgtttgcaaccggattgtttcgaggacatgatagcgttagtggcactgttcagacca
ggaccgctacagtctagtatggtgaataatttcatcgaccgtaagcacggccgtgaagct
atctcttaccccgatatagagtggcaacacgaatcattgcagccggtgcttgagtcaact
tatggcattattttatatcaagaacaggtaatgcaaattgcccaggtgttggcaggatac
actttggggggcgcggatatattacgccgcgcaatgggtaaaaagaaaccagaggagatg
gctaaacagcgttcagtgttcaaagccggcgctcagcgtatcggcatagatggcaaacta
gcaataaaaatctttgatttactagagaaatttgctggttacggttttaataaatctcat
tctgccgcctatgcattggtgtcttatcagacattgtggttgaaagcccattatcctgct
gaatttatggctgcagtaatgaccgccgatatggacaataccgataagatggttgggtta
gtggatgaatgtctgcgcatggggatcaaagttctaccaccagacattaacattggccaa
tatcattttcacgttaacgacgagggagagatagtttatggcatcggtgctattaaaggg
gttggcaagggacctattgaggccatgatcgaagctcgtaataacgatggcccttttctt
gaattattcaatttatgtgcgcgtaccaatatcaaaaaacttaaccgccgggtactggag
aagctaattatgtccggcgccttcgaccgcttaggaccacaccgtgcggcgatgatgaat
tcacttagcaaagcgctcaaagctgctgagcagcacaccaaggccaaggcaatcgggcaa
ggggatatgttcggcgtattggcggataagcctgaagcagtagaagcctcttacagtact
gtctcgccctggccggaacaggtattactagacggcgagtgcgagacgcttggccagtat
ttaactggccatcctatcactcagtatttacacgagatagaacgctatacggacggtgtg
cgtctgaaagatatgcagccaactgaacgcgggaagatggctaccgcgggaggattagta
ctgtcggcacgcgtcacagtcaccaagcacggtaaccggataggagtttgtacccttgat
gatcagtccggtcggttggacgtgatgctatttaaaaatgcactcaaaaaataccagcat
ttgctaaaaaaataccgtattcttatcgctcaaggacagatcagctttgatgattttaac
ggtggccttaagatgaccgcctgcaaactaatagatatcagctag
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