Candidatus Hoaglandella endobia: TPER_HE00395
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Entry
TPER_HE00395 CDS
T04484
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hed
Candidatus Hoaglandella endobia
Pathway
hed00550
Peptidoglycan biosynthesis
hed01100
Metabolic pathways
hed01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TPER_HE00395 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TPER_HE00395 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hed01011
]
TPER_HE00395 (spoVD)
Enzymes [BR:
hed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TPER_HE00395 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hed01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
TPER_HE00395 (spoVD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CUX97311
UniProt:
A0A143WTX3
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All DBs
Position
I:complement(417630..419537)
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AA seq
635 aa
AA seq
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MKIEHNPFRDYSAESALFVRRALIAFAGLLLLTGVLVANLYHLQIVRFEDYRTRSNENCI
KLVPIAPNRGIIYDRNGTPLALNRTIYQLELVPEKVGNLQETIATLRFIVDLTDDDIANF
EKERKRSRRFTYLPLKAGLTDVQQARFAVNQYRFPGVEIKRYQRRYYPYGSALTHVIGYV
SKINNRDIERLNKESILPNDAATYDIGKLGIERYYESTLHGKTGYEEVEIDNRGRFIRQL
HKQQPQAGKDITLTLDLSLQQYIEKLLAGSRAAVVVVDPRDGGIRALVSNPSYDPNLFVD
GISSKDYHALLENKNLPLINRATQGVYPPASTVKPYISVSALTLGVINKNFSLFDSGWWQ
LPRSEKRYRDWKRCGHGSLNVTKALEESADTFFYQVAYDMGIDRISEWMTKFGYGQYTGI
DLSEECAGIMPNPDWKISRFKKPWYKGDTIPVGIGQGYWTATPVQMSKALMTLINDGAVR
TPHLFYSTRKNCRQVPYRQTQHVQIGDPYSGYWKIVKDGMYGVANRPNGTAHKSFADTPY
KVAAKSGTAQVYGLKANEIYNAHRISERLRDHKLMTAFAPFDNPTVAVVVILENGGVGPA
VGTITRQILDHILLNESTKDLPTQSMPCLATRAIN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaacataaccctttccgagactattcagctgagtcggcgctgttcgtccgc
cgtgcattgatcgctttcgctgggcttttgctacttaccggtgttcttgtagctaatctg
tatcatttacaaattgtccgcttcgaagattatagaacgcgttctaacgagaactgtatt
aagttagttccaatcgcgccgaatcgtggcattatttatgaccgtaacggtaccccgtta
gctcttaaccgcactatttaccagctggagctggtgccggagaaagtaggtaacttacag
gaaactattgctactttgcgctttatagtagatttgactgacgatgatatcgcaaacttt
gaaaaggagcgtaaacgctcccgtcgctttacctatctccctctgaaagcaggtcttact
gacgtgcagcaggccagatttgccgtcaaccagtatcgttttcccggtgtcgagataaaa
aggtatcagcgccgctattatccttatggctccgcgctcacccatgttatcggttatgta
tcgaaaataaacaatcgagatatagaacggctgaataaggaaagcatcctgcccaatgat
gccgctacttacgatattggtaaattgggcatcgaacggtactacgaaagtacactgcac
ggtaagaccggctatgaagaggtcgagatcgacaaccgtggccggtttattcggcaactg
cacaagcagcagccacaggctggtaaagacattaccctgactttggatctcagtctacag
caatatatcgaaaaattgctggctggcagccgcgccgcagttgtggtagtagatcctcgc
gatggcggaattcgcgcgctggtatctaatccaagctatgatcctaacttatttgtggac
ggtatctctagtaaagattatcacgcactactagagaataaaaaccttccgctaatcaac
cgtgctacgcagggtgtctatccaccagcctcaaccgtcaaaccatatatttcggtttcg
gcactgacactaggcgtcattaataaaaatttctctctgtttgattctggctggtggcag
ttaccaagatcagaaaaacgttaccgcgactggaaacgctgtggccatggcagcctaaac
gtaaccaaggcgctagaggagtcagcggatacgttcttttaccaggttgcttatgatatg
ggtatagaccgaatatcagaatggatgactaaatttggctatggtcagtataccggtatc
gatctttctgaagaatgcgctggcattatgccgaatccagattggaaaatatcacgtttt
aaaaagccttggtacaagggagataccatcccggtagggattggccaaggctactggacc
gccacaccggtacaaatgtcgaaagcccttatgacccttatcaacgacggtgcggtacgt
acaccacacctgttttacagcacgcgtaaaaactgcaggcaagttccttatcgtcagaca
cagcatgtgcaaatcggtgatccctattctggctattggaagatagttaaagatggtatg
tacggcgtagctaaccgccctaacggtacggcgcacaaaagtttcgccgacacgccttat
aaggtggcggcgaagtctggtacagcacaggtctatggcctgaaagctaacgaaatctat
aatgcccatagaatctccgagcgtctaagagatcataaactcatgaccgcttttgcacca
tttgataacccgacggtggcggtggtggtgattttggaaaacgggggagtgggtcctgct
gtgggtaccattactcgccaaattttggaccatattctcctgaacgagagcaccaaagac
ttaccgacacagagcatgccctgcctggcaacgagagcaattaactga
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