Herbaspirillum sp. meg3: hmeg3_00410
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Entry
hmeg3_00410 CDS
T05024
Name
(GenBank) GGDEF domain-containing protein
Organism
hee
Herbaspirillum sp. meg3
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
dCache_1
HAMP
Cache_3-Cache_2
His_Phos_1
sCache_3_3
Phage_tail_terminator_6
ANIS5_cation-bd
dCache_2
Motif
Other DBs
NCBI-ProteinID:
ASU41171
UniProt:
A0A223PGW5
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Position
complement(82698..84428)
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AA seq
576 aa
AA seq
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MKKALDFVSLKLLRKIEIRYRLINSFVLVSLVPLLIAGIVAYRESSSASQEKIRIFAGEV
VKQVAQNMLQQVEKIESSSEELVVSERMQNALSAYYSGSESDRAAARAGMTRLMLENYGS
FEYINQKYVLDRKHRIIDSQVFAQLGNGVTHFAEDAPDMKGRPYWSVYSTAAGQKSVVML
RDILFKSNNRRAGTLFIGLKPTHFSRIFDSVDLGYGSRLFVVDSRDGRIVVSGGQDNSDA
VESGLVAAIAQTVASGGKDFTSYQDSNKKKHLAAFAPIPHTDWMVVSTTPLNALNAEVRS
IRNKIILIGVLCFIVSFALSFIIARSISLPLKQLVGVMKETKTGNYLIRMDYEGKDEITV
LSQRFNEMASKVYQHNEHLEEQVAARTRELELANQQLEALSATDSLTGIANRRRFDEALT
SELRRAVRSQKPLALLMLDVDFFKNYNDRYGHLAGDACLRTVAQILRTSSRRATDLAARY
GGEEFSVIVAESDSERAMQLAENIRAAIENLHIPHEDSPFGFVTCSIGVIAVQVDDSMST
DTLLRLADAAMYLAKSQGRNRVVRNDGNVTTGRSAV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcgctggattttgtgtccctgaagctgctgcgcaagattgagatccgctat
cggctgatcaattcttttgtactggtatcactggtgccgttgctgatcgccggtatcgtt
gcctaccgcgaatcgagcagcgcctcgcaggaaaagattcgtatcttcgccggcgaagtg
gtcaagcaggttgcgcagaacatgctgcaacaagtcgagaaaattgaatcctccagtgaa
gagctggtcgtttccgaacgcatgcaaaatgcgctgtcggcttattacagcggcagcgaa
tcggatcgcgccgcggcacgcgcgggcatgacccggctgatgctagagaactacggttcc
tttgaatacatcaaccagaaatacgtgctggatcgcaagcacaggatcatcgattcgcaa
gtctttgcacaactcggcaacggtgtgacgcatttcgccgaggatgcacccgatatgaag
ggccggccctactggagtgtctacagcaccgctgccggtcagaagagcgtggtgatgctg
cgcgacattctcttcaagagcaacaaccggcgggcgggcaccttgttcatcggactcaaa
ccgacgcatttttcacgcatctttgattcagtcgatctgggctatggctcacggctgttc
gtggtcgacagccgtgatggccgtattgtcgtcagcggcggccaggacaacagcgatgcg
gttgagtcaggtctggtcgcagcgatcgcccagacggtcgccagtggcggcaaagatttc
acctcttatcaggacagcaacaagaagaaacatctggccgcctttgccccgattccgcat
accgactggatggtggtcagcaccacgccgctcaatgcgctcaatgccgaagtacgatcg
atccgcaataagatcatcctgatcggtgtgctgtgcttcatcgtgtcgttcgccctgtcc
ttcatcattgcgcgcagcatctcgttgccgctcaaacagctggtcggcgtcatgaaagag
accaagacaggcaactacctgatccgcatggattacgagggtaaggatgagatcaccgtg
ctgtcgcagcgcttcaatgaaatggccagcaaggtctatcagcacaacgaacatctggaa
gaacaggttgccgcgcgcacgcgtgagctggagctggccaatcaacagcttgaagccctc
agcgccaccgacagcctgaccggcatcgccaaccggcgccgtttcgacgaagcgctgacc
agcgaattgcggcgtgccgtacgatcgcaaaagccgctggcgctgttgatgctggatgtg
gattttttcaagaattacaacgaccgctacggccatctggccggcgacgcctgcctgcgc
accgtggcgcagatcctgcgcaccagctcgcgccgcgccaccgacctggcggcgcgttac
ggcggcgaagagttctccgtcatcgtggctgagagcgacagcgaacgcgccatgcaactg
gccgaaaatatccgggccgccatcgagaacctgcatattccgcacgaagattcgcccttc
ggcttcgtcacctgcagcatcggtgtcatcgccgtgcaggtcgacgacagcatgagcacg
gacaccttattgcgcttggccgatgccgcgatgtatctcgccaaatcgcaggggcgtaat
cgcgtcgtgcgcaatgacggcaacgtcaccaccggcagatcggcagtctga
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