KEGG   Herbaspirillum sp. meg3: hmeg3_01980
Entry
hmeg3_01980       CDS       T05024                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
hee  Herbaspirillum sp. meg3
Pathway
hee00521  Streptomycin biosynthesis
hee00523  Polyketide sugar unit biosynthesis
hee00525  Acarbose and validamycin biosynthesis
hee00541  Biosynthesis of various nucleotide sugars
hee01100  Metabolic pathways
hee01110  Biosynthesis of secondary metabolites
hee01250  Biosynthesis of nucleotide sugars
Module
hee_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:hee00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    hmeg3_01980 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    hmeg3_01980 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    hmeg3_01980 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    hmeg3_01980 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    hmeg3_01980 (rfbB)
Enzymes [BR:hee01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     hmeg3_01980 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short Phage_g100 NAD_binding_10 KR
Other DBs
NCBI-ProteinID: ASU37183
UniProt: A0A223P4X8
LinkDB
Position
complement(432867..433934)
AA seq 355 aa
MIFVTGGAGFIGSNFILDFLASQDEHVLNIDKLTYAGNPYNLTSLDGDERYHFVQADIAD
REKIAQLFEQHQPRAIIHFAAESHVDRSIHSPGEFIHTNVNGTFSLLEAARAYWSGLEPK
RKTAFRFLHVSTDEVYGTLGPNDPPFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLPT
LTTNCSNNYGPYHFPEKLIPLVILNALDGKSLPIYGDGQQIRDWLFVSDHCAAIRQVLAR
GRVGETYNIGGWNEKTNLDVVYTLCDILDQQKPKATGSYRDQITFVQDRPGHDRRYAIDA
RKLERELGWKPAETFETGIAQTVRWYLDHPHWVANIRTGGYLKWLELHYGTTEEE
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgatatttgtcacaggcggcgccggtttcatcggcagcaatttcattctggacttcctg
gcgagccaggatgagcacgtcctcaatatcgacaagctgacttacgccggcaacccgtac
aatctgaccagcctcgacggcgacgaacgctaccacttcgtacaggccgatattgccgat
cgcgaaaaaatcgcgcagctgtttgaacaacaccaaccgcgcgcgatcatccacttcgcc
gccgaaagtcacgttgatcgctccattcacagtcccggcgaattcattcacacgaacgtc
aacggcaccttcagtctgctggaggctgcgcgtgcttattggtcgggtctggagccaaaa
agaaaaacggcattccgcttcctgcacgtgtcgaccgatgaagtctatggcacccttggg
ccaaacgatcctcccttcagtgaaactacgccttacgcaccgaacagcccttattccgct
tccaaggctgcgtcggaccatctggtgcgcgcttatcatcacacctacggtctgccgacg
ctgaccaccaattgctccaacaattacggcccgtatcacttccctgagaagttgatccca
ttggtcatcctcaacgcacttgacggcaagtcactgcccatctatggcgatggtcagcaa
atccgtgactggctattcgtcagcgatcattgcgctgcgatacgccaggtactggcacgc
ggcagggtcggcgaaacgtataacatcggcggctggaacgaaaaaaccaacctcgacgtg
gtgtacacgctgtgcgacattctcgatcagcaaaaaccaaaagcaaccggtagctatcgc
gaccagatcaccttcgtgcaagatcgtccggggcatgatcgccgctatgccattgatgcc
cgcaagctggagcgtgaactcggatggaaacccgcggagacctttgaaaccggtatcgcc
caaactgtacgctggtatctcgatcacccgcattgggtcgccaacatccgtaccggcggt
tatctgaaatggctggagctgcactacggcaccacggaggaagaatga

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