Herbaspirillum sp. meg3: hmeg3_02600
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Entry
hmeg3_02600 CDS
T05024
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hee03016
]
hmeg3_02600
Transfer RNA biogenesis [BR:
hee03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
hmeg3_02600
Prokaryotic type
Methyltransferases
hmeg3_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Ras
MCM
Roc
Arf
Motif
Other DBs
NCBI-ProteinID:
ASU41207
UniProt:
A0A223PGL5
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All DBs
Position
567060..568466
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AA seq
468 aa
AA seq
DB search
MTLDTSPIAAIATAPGRGGIGVVRISGKNLWPVVQAICGKDESSLTPRQATYLPFKRADG
SAIDQGLAIYFKAPHSYTGEDVLELQGHGGPVVMQMLLARCLEAGAEIGLRLAEPGEFTQ
RAFLNDKLDLAQAEAVADLIEASTEAAAKSASESLSGAFSKVIHDLVNKVTNLRMLVEAT
LDFPEEEIDFLEQSDARGQLAAIRATLDDVFMHASQGALLRDGLNVVLAGKPNVGKSSLL
NVLAGSDVAIVTPIAGTTRDKVTETIQIEGMPLNIIDTAGIREAGDDGSGPDEVERIGIE
RTWGEVAKADVILHMLDADRGPTLEDEKITERFPDGVPVIRIWNKIDRSGHKPAVDQMSD
ATHIYLSATDHLGIDLLRGELLRIAGWQQTVESRYLARERHLIALKAAREYLESAAAHAS
VDNQASDKSLDLFAEELRLAQERLSSITGKFTPDDLLGVIFSRFCIGK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgatacttctcccattgccgccattgcgaccgccccgggacgcggcggcatc
ggtgtggtccgcatctccggcaaaaatctgtggccggtggttcaagccatctgcggcaag
gatgaaagctcgctgacgccgcgtcaggcgacctatctgccgttcaagcgtgctgacggc
agtgccatcgaccaggggctcgccatctatttcaaagcgccgcattcctataccggtgaa
gacgtgctggagttgcaaggccacggcgggccggtcgtcatgcaaatgctgctggcacgc
tgccttgaggccggtgccgagatcggcctgcgtctggcggagccaggtgagttcacgcag
cgcgctttcctcaacgacaagctcgatctggcgcaggccgaagcggtcgccgacctgatc
gaagcatcgacggaagcagccgccaagtcggcttcagaatccttgtccggcgctttctca
aaagtcatccacgatctggtcaacaaggtcaccaacttgcgcatgctggtcgaagcgaca
ctcgatttcccggaggaagaaatcgacttcctcgagcagtctgatgcgcgcggccagctt
gccgcaattcgcgccacactcgacgatgtcttcatgcacgcctcacaaggcgccttgctg
cgcgacggcctcaatgtggtgttggcggggaagcccaatgtcggcaaatcgtcgctgctc
aacgtgctggccggttccgatgtcgccatcgtcacaccgatcgccggcaccacgcgcgac
aaggtgaccgagacgattcagatcgaaggcatgccgctcaatatcatcgatactgccggc
atccgtgaagcgggcgatgacggtagcggccccgacgaagtggagcgcatcggcatcgaa
cgcacctggggtgaagtcgccaaagctgacgtcatcctgcacatgctcgacgctgaccgt
gggccgacactggaagatgaaaaaatcaccgagcgttttccggacggtgttcccgttatc
cgcatctggaacaagatcgaccgttccggccacaagccggctgttgatcagatgtctgac
gcgacgcatatttatctgtccgccaccgatcacctcggtatcgatttgctgcgcggagaa
ctgctacgcatcgccggctggcagcagacggtggagtcgcgctacctggcgcgcgagcgt
catctgatcgctttgaaggcggcgcgcgaatatctggaaagcgcagccgcgcacgcgtcg
gtcgacaatcaggccagcgacaagtcactcgatttgtttgcggaagaactgcgtctggcg
caggagcgcttgagcagcattaccggcaagttcacaccggacgatttgctgggggtgatc
ttctcgcgcttctgtataggcaagtaa
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