Herbaspirillum sp. meg3: hmeg3_03340
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Entry
hmeg3_03340 CDS
T05024
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hee03021
]
hmeg3_03340 (rpoH)
Transcription machinery [BR:
hee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
hmeg3_03340 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ASU37425
UniProt:
A0A223P5P1
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Position
complement(727289..728179)
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AA seq
296 aa
AA seq
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MKSATALMPVETNALALGFSGSLGNIDAYISAVNRLPMLTQAEEVSLAQSLRDKNDLAAA
QKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQNVRLVSYAMHWIK
AEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKEGLDAMTPAQVDALAKTLDVKREEVIE
METRLSGRDVALEAPTDDEDDKFAPIAYLSSDNSEPTRVMEAKQYDRLQSEGLEAALSKL
DDRSRRIVEARWLANDDGSGATLHELADEFGVSAERIRQIEAVALKKMKGALQAFS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagctactgcacttatgcccgtcgagaccaatgcgcttgcgctcggcttctcc
ggcagcctgggcaatattgacgcctacatttcggccgtcaatcgcctgcctatgctgacg
caggctgaagaagtttcgctggcgcaaagtctgcgcgacaaaaatgacctcgctgcagcg
caaaaactggtgctgtcgcacttgcgcctggtggtctcgatcgcccgcggctatctgggt
tacggcctgccgcatgccgacctgatccaggaaggtaatatcggcctgatgaaagcggtc
aaacgcttcgatccggatcaaaacgtgcgtctcgtgtcatacgcgatgcactggatcaag
gccgagatgcacgagtacatcctgaagaactggcgtttggtcaaagtagcgaccaccaag
gcccaacgcaaactgttcttcaatctgcgcagccacaaggaaggtctggacgccatgacg
ccggcgcaagtcgacgcgttggccaagacgctggacgtgaagcgtgaagaagtcatcgag
atggaaacccgtctgtccggccgcgacgttgcactggaagcgccgaccgacgacgaagac
gacaaattcgcaccgatcgcttacctgtcctcggacaacagcgaaccgactcgcgtgatg
gaagccaagcaatacgaccgtctgcaatcggaaggtctggaagcagcgttgagcaagctg
gatgatcgttcacgccgcatcgtggaagcacgctggttggccaacgacgacggcagcggc
gctacattgcacgaactggctgatgaattcggcgtgtctgccgaacggattcgccagatc
gaagcggttgcgctgaaaaagatgaagggcgcgctgcaggcgttttcctga
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