Herbaspirillum sp. meg3: hmeg3_03875
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Entry
hmeg3_03875 CDS
T05024
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_03875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_03875
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
hmeg3_03875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
Mg_chelatase
nSTAND1
ABC_ATPase
AAA_5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ASU41234
UniProt:
A0A223PGM7
LinkDB
All DBs
Position
837356..838366
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AA seq
336 aa
AA seq
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MSVLLDVKNLRVDLPTENGMLHAVRGIDFQVKRGEMLCLVGESGCGKSMTSLALMGLLPR
KAICTADRMAFDGVELIGLPDKKLNQLRGQRMSMIFQEPMTSLNPAYTLGNQLCEAMLEK
PGVTRAEARERAIYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMALMCGPDLIIADE
PTTALDVTIQAQILRMIRELQREFGTAVVFITHDLGVVSRIADRVAVMYAGQVVETTDVA
QLFASPRHPYTRGLLNCIPVRGKTLPGSKLQAIPGVVPSLVGNISGCVFRNRCSLADATC
EQDPPMVNTAVGDKIHYARCHKVVPADAVQLSEVAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcttactcgatgtaaaaaatctgcgcgtcgatctgccgaccgaaaacggcatg
ctgcacgccgtgcgcggcatcgacttccaggtcaagcgcggcgagatgctctgcctggtc
ggcgaatccggttgcggcaagtcgatgacttcgctggcgctgatgggactgttgccgcgc
aaagctatctgcaccgcagatcgcatggcatttgacggcgttgaactgattggtctgccg
gacaaaaagctgaatcaactgcgcggtcagcgcatgtcgatgatttttcaggagccgatg
acttcgctcaacccggcttacacgctgggcaatcagctgtgcgaagctatgctggaaaag
cccggcgtcacccgcgccgaggcccgtgagcgtgccatttatctgctgcaccgcaccggc
atcagcaatgccgaagaccgtctgcgccagtatccgcaccagctctccggcggccttcgc
cagcgcgtcatgatcgcgatggcgctgatgtgcggccccgatctgatcatcgccgacgag
ccgaccaccgccttggacgtcaccatacaggcgcagattttgcgcatgatccgcgagctg
cagcgcgagttcggcacggccgtggtgttcatcacccacgacctcggcgtggtctcgcgc
atcgccgatcgcgtcgccgtgatgtatgcggggcaagtggtggaaaccaccgacgtcgca
caacttttcgcctcgccccggcatccctacacgcgcggtctgctcaactgtattcccgtg
cgtggcaagacactgccgggcagcaagctgcaagcgatccccggcgtggtgccaagtctg
gtcggcaacatcagcggttgcgtttttcgcaatcgctgttcgttggctgatgctacgtgt
gagcaggatcctcccatggtcaatacggccgtcggcgacaagattcactatgcacgatgc
cacaaggtcgtgccagcagatgcggtgcaactgagcgaggtggcggcatga
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