Herbaspirillum sp. meg3: hmeg3_03945
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Entry
hmeg3_03945 CDS
T05024
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_03945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_03945
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
hmeg3_03945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASU37529
UniProt:
A0A223P5W9
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All DBs
Position
complement(856556..858145)
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AA seq
529 aa
AA seq
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MSSSQSPARLLLKMSVMSAMSTIAALSATSAFAQNPAQIVVAQPADIRSTNPGVNRDNTT
DGVVLNIVEGLVGYHENGSVGPLLAKSINVSPDGLTYTFKLRPGVKFHNGDPMTSADVLW
SWNRYMNPKTDWRCLSDFDGRSGTKVLSATAPDAQTFVLKIDKPSAIFLDNLARTDCAMA
AVISKKSVKADGSWDKPIGTGPYKFDEWKRGEYVTLSAFADYQSPPGNKPDGYLGLKKPQ
IPQVKFLDVPDMSTSKAGLQSGAIDAGQITSSDVKELKANRNLNVIIPSEAGKNTLLMQT
NDPVLKDERIRQAIALSLDMKQIVEAASEGLAHVNNSAIYDKSLFYSAEQKKGYVYNPTK
AKLLLQQAGYRGQPIVIQANKRAHVPSYTVAVLSQAMMQAVGINAQIEVLEWATQLDRYN
SGNYQMSSFTYSSRLDPALSYEQFSGNKAKQSRKVWDDPAAQKLIDQSFIESDTKKRQVL
FDQLHNMLITKTPLIVLYNVTDSWAIRKRVNGYTVWESKPLMWTSSLAK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcacagtctccagcacgcctgctgctgaaaatgagcgtaatgagtgccatg
agtaccatcgcggcgttgagcgcaacgtctgcttttgcacagaatccagcgcaaatcgtc
gtcgcgcaaccggcagatatccgctccaccaatcccggcgtcaatcgcgacaacacgacg
gacggcgtggtgctcaacattgtcgaaggtctggtcggctatcacgaaaacggttcggtc
ggtccgttgctggcgaagtcgatcaacgtcagccccgacggcctgacctataccttcaag
ctgcgtcccggcgtcaagtttcacaacggcgacccgatgacctccgccgatgtgctgtgg
agctggaaccgctacatgaatcccaagaccgactggcgctgtctgagcgattttgacggc
cgctccggcaccaaggtcttgtcggcaacggctcccgatgcgcaaacctttgtgctgaag
atcgacaagccatcggccatcttccttgacaacctggcgcgtaccgattgcgctatggct
gcggtcatcagcaaaaaatccgtgaaagcagacggcagctgggacaagccgatcggcacc
ggcccgtacaagtttgacgaatggaagcgcggcgaatacgtcaccctgagcgccttcgcc
gattatcaatcgccaccgggtaacaagccggacggctatctcggcctgaagaagccgcag
attccgcaggtcaagttcctcgacgtgcccgacatgtccacctccaaggccggcctgcaa
tccggcgccatcgatgccggccagatcacctcgtccgacgtcaaggagctgaaggccaat
cgcaatctgaatgtgatcatcccaagcgaagccggcaagaataccctgctgatgcaaacc
aacgatccggtgctgaaagatgaaaggatacgtcaggcgattgccttgtcgctggacatg
aagcagatcgttgaagccgcttccgaagggctggcgcacgtcaataattccgcgatttac
gacaagtcattgttttacagcgcagagcaaaagaagggctacgtctacaaccccaccaag
gccaagctgttgctgcaacaggccggctatcgcgggcagcctatcgtgatccaggccaac
aagcgcgcacacgtgccgagctataccgtggccgtgctaagccaggcgatgatgcaggcg
gtcggtatcaatgcgcagatcgaagtgctggaatgggccacgcaactggaccgctacaac
agcggcaattaccagatgagttccttcacgtattcgtcacgtctggatccggcgctgagc
tatgagcagttttccggcaacaaagccaagcagtcgcgcaaggtgtgggacgatcctgcc
gcgcaaaagctgattgatcagagctttatcgaatccgacaccaagaagcgccaggtgctg
ttcgatcaactgcacaacatgctgattaccaagacgccgctgatcgtgctgtacaacgtg
accgactcctgggccatccgcaaacgcgtcaacggctataccgtctgggaaagcaaaccc
ctgatgtggaccagcagcctggccaaataa
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