Herbaspirillum sp. meg3: hmeg3_04995
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Entry
hmeg3_04995 CDS
T05024
Name
(GenBank) TRAP transporter substrate-binding protein DctP
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
hmeg3_04995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_04995
Transporters [BR:
hee02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
hmeg3_04995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ASU37714
UniProt:
A0A223P6V0
LinkDB
All DBs
Position
complement(1089842..1090849)
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AA seq
335 aa
AA seq
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MSLSSLTKRCALAASVSALLLQAGSAAAQSASLHLINEYPATSITASADLQFAASVKQLS
NGDIAVTTLQEAANPYKGKDQVSAVSSGKAEIGTLFAGILGGSDSFFLLSSLPFVVDDFE
QAQSLFTCTQPELERHLAALNMRLLYATPWPPSGIWSAKAVPDVDAIKALNIRTYDDNSR
GVFQRVGANSVNLPFSAVGPKLVSGELNAVLSSGDGGAGNRLWDHLPNFTAISYAIPLSY
TIINSDVWNKLTPAQQSILTQAAKATSDASWANVKSRIQDNYARMKEHNMQLNLQPAASV
RQALRKAGQEQTDSWWQQDKNSEVQTRCAAVLQAK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtcctcattgaccaaacgttgtgcccttgccgcttctgtctcggccttgctt
ttgcaggccggatcggcagcagcacaaagtgcgtcgctgcatctgatcaacgaatatcct
gctacctcgatcaccgccagcgccgacctgcagtttgcggcctcggtcaaacagttatcc
aatggcgacatcgccgtgaccactctgcaagaagccgcaaatccctacaagggcaaggat
caggtcagtgcagtcagcagtggcaaggcagagatcggcacgcttttcgccggcattctg
ggcggcagcgattcattcttcctgctgtcgtcactgcctttcgtggtggatgatttcgag
caggcgcaatcgctgttcacctgcacccaaccggagctggaacgccatctggcggcgctg
aacatgcgcttgctgtacgccacaccatggccgccatccggcatctggtcggccaaggct
gtgccggacgtcgatgcgatcaaggcgctcaacatccgcacttatgacgacaacagccga
ggcgtcttccaacgcgtcggcgccaatagcgtcaacctgcctttctccgctgtcggcccc
aagctggtttccggcgaactcaatgccgtgctgtcctccggcgatggtggcgcgggcaat
cgcctatgggaccatctgcccaactttaccgcgatcagctatgcgatcccgttgagctat
accatcattaatagcgacgtctggaacaagctgaccccggcacagcaaagcatcctgacg
caagcggccaaagccaccagcgacgcgagttgggccaacgtcaagagtcgtatccaggac
aactatgcccgcatgaaagaacacaatatgcagctgaatctgcagcctgcggcgagcgta
cgccaggcgttgcgcaaggccggccaggagcagactgacagctggtggcagcaagataaa
aatagcgaagtccaaacacgctgcgcagccgtattgcaggcaaaataa
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