KEGG   Herbaspirillum sp. meg3: hmeg3_05150
Entry
hmeg3_05150       CDS       T05024                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hee  Herbaspirillum sp. meg3
Pathway
hee00740  Riboflavin metabolism
hee01100  Metabolic pathways
hee01110  Biosynthesis of secondary metabolites
hee01240  Biosynthesis of cofactors
hee02024  Quorum sensing
Module
hee_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:hee00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    hmeg3_05150 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    hmeg3_05150 (ribD)
Enzymes [BR:hee01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     hmeg3_05150 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     hmeg3_05150 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam 2CSK_N
Other DBs
NCBI-ProteinID: ASU41258
UniProt: A0A223PHJ6
LinkDB
Position
complement(1128466..1129530)
AA seq 354 aa
MALALEQAALGMFTTTPNPRVGCVIVKNRRIIGAGFTQPPGGNHAEIQAMKDAQERGNEV
RGATAYVTLEPCSHFGRTPPCADALVNAGLGRVVSAMTDPNPLVAGKGLEKLQTAGIAVV
SGLMQDAAHEMNIGFFKRMQQGTPWIRMKSAASLDGKTALHNGKSQWITGQAARDDGHFW
RARACAIVTGIGTVKDDNPQLSVRAVNTPRQPRRIVIDSKLTLSPSANILTGGGTWVFTA
SEDREKIAALEDQGAEIIVLPNPANKVDLPRVIAELGKRQLNEVHIEAGSKLNASLIREG
CVDELLLYLAPNLLGDGRSMFDLPALDDLSGKISLRFHEVKQIGEDLRILARFR
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggcgctggcgctggagcaagccgcgctcggcatgttcaccaccacacccaatccccgc
gtcggctgtgtgatcgtcaagaaccgccgcatcatcggcgccggtttcacccagccgccc
ggcggcaaccacgctgaaatccaggcgatgaaagacgcacaggaacgcggcaacgaggtg
cgcggcgcaaccgcctatgtcacgctcgaaccctgcagccattttggccgcacaccaccg
tgcgccgatgcgctggtcaacgccggactcggccgggttgtttcggccatgaccgatccc
aatccactggtcgccggaaaaggtttggaaaaattgcaaaccgccggcatcgccgtcgtt
tccggcctgatgcaggatgctgcccatgaaatgaacatcggtttcttcaagcgcatgcag
cagggcacgccgtggatacgtatgaaatcggccgccagcctcgacggcaagaccgcgctg
cataacggcaagagccagtggatcaccggccaggcggcacgcgacgacggtcatttctgg
cgtgcgcgcgcctgcgccatcgtcaccggcatcggcaccgtcaaggacgacaatccgcag
ttgagcgtacgcgccgtcaacaccccgcgccagccgcgccgtattgtcatcgacagcaag
ctgacactctcaccatccgccaatatcctgaccggcggcggcacctgggtgttcactgcc
agcgaagatcgcgaaaaaattgccgcattggaagatcagggcgctgaaatcatcgtcctg
cccaatcccgccaacaaggttgacctgccgcgcgtgattgccgaactgggcaaacgccag
ctcaacgaagtccacatcgaagccggctccaagctgaacgcttcgctgattcgcgaaggc
tgcgtcgacgagctgttgctgtatctcgcgcccaacctgctcggcgacggccgcagcatg
ttcgacctgccggcgctggacgatctgtccggcaagatctctctgcgcttccacgaggtc
aagcaaatcggcgaagatttgcgtatccttgcacggttccgttaa

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