Herbaspirillum sp. meg3: hmeg3_05575
Help
Entry
hmeg3_05575 CDS
T05024
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hee03009
]
hmeg3_05575
Enzymes [BR:
hee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
hmeg3_05575
Ribosome biogenesis [BR:
hee03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
hmeg3_05575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASU37819
UniProt:
A0A223P6S1
LinkDB
All DBs
Position
1219591..1221576
Genome browser
AA seq
661 aa
AA seq
DB search
MKPSSSNDEKQVDLFGAAADNADTAAAKPAARKRIKKVVADAPVAEEVAPVKKAAVKKTV
TKKAAAEKAATDVAAPVAAAVVAEVAPAGEVAAPKKRATRAKKPVADAAVESAPVAASAS
APVVPAAAPEVPKVIVTIGEEVTAAPVLLDAPADNARTKPARRGVRGPRALRNNRAAQRA
AESSEAAPVNPVVAEAAVSHGAGDANAPVPVADQAMAESRREGQGQDRNRQQKGKKPFAK
GGKPKAPQLGLRSHDAGDDIFSFVTSDAYDREDGAKGGARNGHQLRGKNGRRDLTSEDDA
PKLHKVLADSGLGSRRDMEELIVAGRVSVNGEPAHIGQRILPTDQVRINGKLLQRKVSKK
PPRVLVYHKPAGEIVSHNDPEGRPSVFDRLPNMKAAKWLAVGRLDFNTEGLLLFTTSGDL
ANRLMHPRYNIEREYAVRTLGELEQGMRQKLLHGVELDDGVAQFSKIADGGGEGVNKWYR
VTIGEGRNREVRRMFEAIGLTVSRLIRTRYGMMMLPQGLKRGRWEELEENAVRGMLAACG
LEKVGGDAPAGNGKGRGNSANGNNGNSNGQPRSNANANPMQQKGPRREPWQGQGQGPRQG
QGQGQGQGGRPQQNKPRQPDPLQTALGFPDAGQRRQNRPQRSGGMAGQGMGAGGMPRRRR
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatctagttccaacgatgagaagcaggtagacctctttggtgctgccgcggac
aatgccgatactgccgccgccaaaccggctgcgcgcaagcggatcaaaaaggtagtcgcc
gacgcgcctgtcgccgaagaagttgcgccggtcaagaaggccgccgtcaaaaagacggta
actaaaaaagctgctgctgagaaagctgcgacggatgttgcggcgccagttgccgctgct
gtggttgccgaggtcgcgcccgctggtgaggtcgctgcgccgaagaagcgcgcgacccgc
gccaagaagccggtggctgatgctgctgtggaatctgcacccgtcgccgcctccgcctcc
gctcctgtcgtgcccgccgctgcaccggaagtgccgaaagtcattgtaactatcggcgaa
gaagtgactgccgctccagttttgctggatgcgcctgctgacaatgcgcgcaccaagccg
gctcgacgtggcgtgcgcgggccgcgtgccttgcgtaacaaccgcgctgctcagcgcgct
gcggaaagcagcgaagccgctcccgtcaatccggtggttgccgaggctgctgtttctcac
ggtgcgggcgatgccaatgcgccggttcctgttgctgatcaagccatggctgagtcgcgc
cgtgagggccaaggtcaggatcgcaatcgtcagcaaaagggcaagaagccattcgccaaa
ggcggcaagccgaaggcgccgcaactgggtttgcgctcgcatgatgcaggcgacgatatt
ttctcgtttgttacttcggatgcgtacgacagggaagatggcgccaaaggcggtgctcgc
aacggtcatcagctgcgcggcaagaacggtcgccgcgatctgacctccgaggatgacgca
cccaagctgcacaaagtactggcggattccggtctcggttcacgccgcgatatggaagag
ctgatcgttgccggccgcgtgtcggtcaacggtgagcctgcgcatatcggtcagcgtatt
ctgccgaccgatcaggtgcgtatcaacggcaagttgctgcaacgcaaagtcagcaaaaaa
ccaccgcgcgttctggtctatcacaagcctgcgggtgaaatcgtcagtcataacgaccct
gaaggccgtccatcggtttttgatcgcctgccgaacatgaaggctgcgaaatggctggct
gtcggccgtctcgacttcaacaccgagggactgttgctgtttacaacctccggcgacctc
gcgaaccgcctgatgcatccgcgctacaacattgagcgtgaatacgccgtgcgtacgctg
ggtgagctcgaacagggcatgcgtcagaagctgttgcacggcgtagagctggacgacggc
gtggcgcaattctccaagatcgccgacggcggcggtgaaggcgtcaacaagtggtaccgc
gtgaccatcggcgaaggccgtaatcgcgaagtgcgccgcatgtttgaggctatcggtctg
accgtttcgcgtctgatccgtacccgctacggcatgatgatgttgccgcaaggtctcaag
cgcggtcgctgggaagaattggaagaaaatgccgtacgcggcatgctggctgcctgcggc
ctggaaaaagtcggcggcgatgccccggccggcaacggtaagggacgtggcaacagtgcg
aatggtaataatggcaacagcaatggccagccgcgcagcaacgccaatgccaatccgatg
cagcagaaaggtccgcgccgcgaaccgtggcagggtcaaggtcaggggcctcgtcagggg
caaggccaaggtcagggccaaggcggtcgtccgcagcaaaacaagccgcgtcagcccgat
cctttgcagaccgcgctgggctttccggatgcgggtcagcgtcgtcaaaaccgtccgcaa
cgcagtggtggcatggccggtcagggcatgggcgcaggcggtatgccgcgtcggcgacgc
gggtaa
DBGET
integrated database retrieval system