Herbaspirillum sp. meg3: hmeg3_05600
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Entry
hmeg3_05600 CDS
T05024
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hee03016
]
hmeg3_05600
Enzymes [BR:
hee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
hmeg3_05600
Transfer RNA biogenesis [BR:
hee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
hmeg3_05600
Prokaryotic type
hmeg3_05600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASU37824
UniProt:
A0A223P766
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All DBs
Position
1227470..1228423
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AA seq
317 aa
AA seq
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MAHSSPSQPRPPKIPRVPVHGVLLLDKSVGWSSNDALIKAKRLLNALKAGHTGTLDPFAT
GLLPLCFGEATKFSQDLLEADKTYEAVVHLGIVTNTGDTEGEVLGTKPVNVSLAQIASAL
QQFRGEISQVPPMHSALKRDGKPLYEYARAGITLEREARKVTIHQLELLGYEAPFLRIRV
MCSKGTYIRVLGEDIGALLGCGAHLNQLRRTGVGALTLEGSVTLDQFIALDDSQRTQALL
PVDGLLTTFPAVMLTDVLTERFLHGQRLALGKEGIALPAESGRARVYQESNGRLLGTGLM
QEFGILAPERLISTLSN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattcttcgccttcgcaacctcgccctcccaagattccgcgcgtgcccgtacat
ggtgtgttgctgctggataagtcagtgggctggtccagtaacgacgcattgatcaaagcc
aagcgcctgcttaatgcgctaaaggccgggcataccggcacgctcgatccgtttgcgacc
ggcttgctgccgctgtgcttcggcgaggcgaccaagttttcgcaggatttgctggaggcg
gacaagacctatgaggcggttgtccatctgggtatcgtcaccaacaccggcgacaccgaa
ggggaagtgctcggcaccaaaccggtcaatgtcagccttgcgcagatcgcgtcggcgttg
cagcagtttcgcggcgagatttcgcaagtgccgccgatgcattccgcgctcaagcgtgac
ggcaagcccttgtacgaatatgcgcgcgcaggtatcacgctggagcgtgaagcgcgcaag
gtaacgattcatcagttggagttgctcggctatgaagcgccttttttgcgtatccgcgtg
atgtgcagcaagggcacttatattcgcgtgcttggcgaagatatcggcgcattgcttggt
tgtggcgcccatttgaatcaattgcgccgtaccggtgtcggtgcgttgacgctggagggc
agtgtgacgctcgatcagttcatcgcactcgacgacagccaacgcacgcaagccttgctg
ccggtggacggtttgctgacgacttttccggcggtgatgctgacggatgtgctgaccgag
cgcttcttgcacgggcagcgtctggcgcttggcaaggaaggtattgcgttgccagcagaa
tcaggccgggcaagggtttatcaggaaagtaacgggcgccttctgggcaccggtttaatg
caggaattcggcatactggcgccggaaaggctgatttcgactttgtcgaactag
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