Herbaspirillum sp. meg3: hmeg3_05800
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Entry
hmeg3_05800 CDS
T05024
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02010
ABC transporters
hee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hmeg3_05800
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
hmeg3_05800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_05800
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
hmeg3_05800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
ALGX
Motif
Other DBs
NCBI-ProteinID:
ASU37855
LinkDB
All DBs
Position
complement(1276076..1277296)
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AA seq
406 aa
AA seq
DB search
MLFERSDMKSVHRLRRLLGISLLLAPLYCQPASSEENTQTVLIGFAGPLSWPLTQSGQYG
VQQAIDEANRNRYSINGKKLVFKLLAIDDKADTAVAGFVAKSMIAAGVTGVIGHWTSAPT
TIAAPLYAAAGVPHISASAAAPEFTQQGYNTSFRAIGNSQEAAITIAEFATRELKAKRIA
ILDDTSAFGTRMADTFADQMRASTELVGRSTVSNKTSDFNAALSQFAASEADLIFFSGYL
QRSEDLVRARQRLRVPARLFLTGSVMNPIFLSMTQGVGEGVFAAAPGKPYEEYPQFKTFE
KNFTAKFRTSISVYTLSSYDACNTLIAAIRQANSTERHRIVEELHKIRYKGLLGLISFDA
GGNLRSPVFTVYRIRERRWVPVKTYEARKSSCASDSHADSTACEEN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgaaaggagcgacatgaaatcggtacatcgcctgcgacgcttgctcggcatc
agccttctgcttgccccgctctactgccaacccgcttcgtccgaagaaaacacgcagacc
gtgctgatcggatttgccggccccctttcctggcctctgacgcaaagcggccaatacggc
gtccaacaggcgatcgatgaagccaatcgcaaccgctattccatcaatggaaaaaaactg
gtcttcaagctactcgccatcgatgacaaagcggatacggcggtggccggctttgtcgcc
aaatcgatgatcgccgccggcgttaccggcgtcatcgggcactggacgtcggcaccgacc
actatcgcagcaccgctctatgcggcagccggtgtgccgcacatcagcgcgtcagccgcc
gcaccggaattcacccagcaaggctataacaccagcttccgcgccatcggcaacagccag
gaagctgcaattaccattgccgagtttgcgacccgcgagttaaaggcaaaacgcatcgca
atactcgatgatacttccgcttttggcacgcgcatggcagacaccttcgccgatcagatg
cgtgcctccaccgaactcgtcggccgaagcactgtcagcaacaaaacgtccgatttcaac
gctgcgctttcgcaatttgcggccagcgaggccgatctgattttcttcagcggctacctg
cagcgcagcgaagatctggtacgcgcccgacaacggctacgtgtgccggccagacttttt
ctgaccggcagcgtgatgaatccgatttttctcagcatgactcagggcgttggcgaaggt
gtctttgcagcggcgcccggcaagccttacgaagaatatccgcaattcaaaacatttgaa
aaaaacttcacggcaaaattccgcaccagtatcagcgtctacacgctgtcgtcgtacgat
gcttgcaacacgctcattgccgcaatcagacaagccaattcgacagagcggcaccggatc
gtagaagaactgcacaagatccgctacaaaggattgctgggcctcatatcctttgatgcg
ggcggcaatctccgcagtccggtatttaccgtctatcgcatacgagagcggcgctgggta
cccgttaaaacctacgaggcccgcaagtcatcctgcgcgtccgattcacacgcagacagc
actgcctgcgaagaaaattga
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