Herbaspirillum sp. meg3: hmeg3_06620
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Entry
hmeg3_06620 CDS
T05024
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hee03009
]
hmeg3_06620
Enzymes [BR:
hee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
hmeg3_06620
Ribosome biogenesis [BR:
hee03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
hmeg3_06620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASU41290
LinkDB
All DBs
Position
complement(1461963..1462529)
Genome browser
AA seq
188 aa
AA seq
DB search
MPLILFNKPFQVLCQFSAHPEHDTLANYLDIPDIYPAGRLDADSEGLMLLTDDGQLQHEI
SHPKRKQPKVYLVQVDGVPDRDTLERLRNPLDLGDFVTQRSEVKHVAEPDWLWPRNPPIR
VRKSQPTSWLTIKISEGKNRQVRRMTAAVDLPTLRLVRIAIGPFSLQTDPLMPGEWKAVE
PGELNRQT
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgattttgttcaacaaaccgtttcaggtcctgtgccagttctcggcacatccg
gaacacgatacgctggcgaattacctcgacattcccgatatttaccccgctggccgcctg
gacgccgatagtgaaggcttaatgctgctgactgacgacggccaattgcagcatgagatc
agccatcccaaacgcaagcagccaaaagtttacctggtgcaagtagatggcgtccctgac
cgggacacgttggaacggctgcgcaatccactcgatctgggtgatttcgtgacacagcga
agtgaagtcaaacatgttgccgagccagactggctgtggccgcgcaatccgccgatacgc
gtaaggaagagtcagccgaccagttggcttaccatcaagatctccgaaggaaagaatcgc
caggttcgccgcatgaccgccgctgtcgacctgccaacgttgcggctggtgcgcattgct
atcggccctttttcactgcaaaccgaccctctgatgccgggtgaatggaaggcagtggaa
ccaggcgagctgaatcgccaaacctga
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