Herbaspirillum sp. meg3: hmeg3_06880
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Entry
hmeg3_06880 CDS
T05024
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_06880
Transporters [BR:
hee02000
]
Other transporters
Pores ion channels [TC:
1
]
hmeg3_06880
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ASU38049
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Position
1523837..1526002
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AA seq
721 aa
AA seq
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MSFFSFRRHAYGSFLCTARLRPLAIAICSIASSFDYAYAAEEAGSEAGLPTVEIRSKRSH
YDPRPASVNTATRSDTETRDIPQTINSVAVEDVASYGGRTLADALSGIPGISNASDTRFD
AFRIRGFSSVGDLFLDGIRDDAQYVRGLGNIERVEVLKGPAAVLYGRGSGGGVINRISKQ
PGHDVQNSVQVSAGSYGRLGASADVNQVLSDEWTMRVNAGRERADSFRSGVDSTRQYVAP
SIKWDDQRTSWLLQTEYNEFERVPDRGMPAGRRANGSYYLPPAAPSTTYGALGRDDIKDT
STNIRSTLEHKFNNQWKIRNVLSVLALDSRFDNTFAGGLAGPGNSMVTRSRFLQDLKQRN
LQAGLELEGKVMTGSVEHRLLFGSEYTDETRHPRLWRANATSVSLLTPNNAPDNGPTPTV
FSNSVHKARGYALYAQDQIRLSPQWQILAGLRWDRFAADSLNQVNNSRAQRTTAAISPRL
GVVWSPLRDHSFYASYSKNFIPSGGADTVGLDTGTTSNVNALDPQFSRQVEVGVKSDWFD
KKISSTLAIFQLDLYNRRTQVASSPDLFVLTGLERNRGIELGVNGQLASNWFIRSGFSVQ
NARVLESGSCRTCGTNIQGKRSVGVSSANGSLFISYAPTQGFFAETGVVYEGARYVDINN
SLDLPAYTRWDAKMGYRFRNAEVTFAVANLANKNYYVTSTGLSQIMPGSPRSGLLSAAYK
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttttttctttccgtcgtcatgcttacggaagcttcctttgcactgcacggctg
cggccgctggccattgccatctgctctatcgcgtcttctttcgactacgcttatgcggct
gaagaagccgggagcgaggctggattgcccacagtcgagatccgcagcaagcgcagccac
tacgatccgcgtcctgcttcagtcaataccgccaccagatcggacaccgagacgcgcgac
ataccgcaaaccatcaacagcgttgcggtggaagacgttgcatcgtacggtggacgcacc
ctcgcagatgccttgagcggcattcccgggatttcaaatgcttcggacacacgctttgat
gcattccgtattcgcggtttttccagcgtcggcgacttgttcctcgatggtattcgcgac
gatgcgcaatatgtacggggtctcggtaatatcgagcgcgtcgaggtactgaagggacct
gcagcagtgctttatgggcggggaagcgggggcggtgttatcaatcgcatcagtaagcaa
ccgggacatgacgtgcaaaacagcgtgcaggtaagcgccggcagctatggccgtcttggc
gcatcagccgatgtcaatcaggtgctatccgacgaatggacaatgcgcgtaaatgccggt
cgagaacgtgccgacagctttcgcagcggtgtcgacagcacgcgccaatatgtcgcgcca
tcgatcaagtgggacgaccagcgcacaagttggttattgcagaccgaatacaatgagttt
gaacgggttcctgatcgcggcatgccggcaggacgacgcgccaacggcagttactacttg
ccgcctgcagcgccatccaccacgtacggtgcgctggggcgcgatgacatcaaggacacc
agcaccaatatccggtcgacgctggaacacaagttcaacaatcaatggaaaattcgcaac
gtcctcagcgtgttggcgttggacagccgtttcgacaacactttcgctggaggtcttgca
ggacctggcaacagcatggtgacacgcagccgctttttgcaggatctgaagcaacgcaat
ctgcaggccggcctcgagctggagggcaaagtcatgacgggtagtgtggaacaccgattg
ctgttcggtagtgaatataccgatgaaacccgtcatccccgcttgtggcgagccaatgcc
acgtcagtatcgctgctgacgccaaataatgcgccagacaacggcccgaccccgacggta
ttttccaatagcgtacacaaagcgcgcggctatgcgctctatgcgcaggatcagattcgc
ttgtcgccgcagtggcaaatactggcaggcttgcgttgggatcggtttgccgctgattca
ttgaatcaggtcaacaatagccgcgcccagcgcaccactgctgcaatcagccctcgactg
ggcgttgtgtggtcgccgctgagggatcacagtttttacgcctcctatagcaagaacttc
atcccctccggcggtgccgacacggtcggactcgacaccggcactaccagcaacgtcaac
gcactcgatccgcagttcagcaggcaggtggaagtgggcgtcaagagcgattggttcgac
aagaagatcagctccacgctggccatcttccagctcgatttatacaaccgccgtactcag
gtagcttccagtcccgatctgttcgtgctgaccggccttgaacgcaatcgcggtatcgag
cttggcgtcaatggtcagttggcgagtaactggttcatccgcagcggtttcagcgtgcag
aatgcgcgcgtgctggaatccgggtcgtgccgtacctgcggaaccaatatccagggtaag
cgttccgtgggcgtttcgagcgcgaatggcagtctcttcatcagctatgcaccgacgcaa
ggcttcttcgccgaaaccggcgttgtctatgaaggcgcacgttacgtcgatatcaacaac
tcgctggatttgccggcatacacgcgttgggacgcaaaaatgggttatcgattccgcaat
gccgaagtgacgtttgcggtggccaatcttgccaacaaaaattactacgttacatcgacg
gggttgtcgcagatcatgccgggcagtccgcgcagcggcttgttgagcgcggcgtacaaa
ttctga
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