Herbaspirillum sp. meg3: hmeg3_07035
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Entry
hmeg3_07035 CDS
T05024
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02010
ABC transporters
hee02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hmeg3_07035
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
hmeg3_07035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_07035
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
hmeg3_07035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Glycos_transf_1
DUF3761
TraO
PucR
Motif
Other DBs
NCBI-ProteinID:
ASU38076
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All DBs
Position
complement(1560134..1561090)
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AA seq
318 aa
AA seq
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MNTRIRLKLIAATVLACALPTLPAMAQTAAKPKVALVMKSLANEFFLTMENGAKEHQKAH
AAQYDLIANGIKDEQDTANQIKIVEQMIVSKVSGLVIAPADSKALVPVIKKAIDAGIIVV
NIDNKFDDAALKEKGITVPFVGPDNRKGAKLVGDFLAKQIKSGDKVAIIEGVSTTFNAQQ
RTLGFQDAMAAAGAKVVSVQSGQWEIDPGNKVAASMLNAHPDIKAILAGNDNMALGAVAA
VKAAGKAGKVLVVGYDNINAIKPMLKDGRVLATADQFASQQAVFGIETVLKALADKKPQN
SLGGTVETKVSLVTKDSK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacgtatccgcctcaagctgattgccgccaccgtcctcgcctgcgcgctgccg
acattgccggccatggcccagaccgcggcaaaaccgaaggttgcgctggtgatgaagtcg
ctcgccaacgagttcttcctgaccatggaaaacggcgccaaagaacaccagaaggcccac
gctgcgcaatatgacctgatcgccaacggcatcaaggacgaacaagacaccgccaatcag
atcaagatcgtcgaacagatgatcgtgtccaaagtcagcggcctggtcatcgcaccggct
gactccaaggcgctggttccggtgatcaagaaggcgatcgacgccggcatcatcgtggtc
aacatcgacaacaagttcgacgacgcagcactgaaggaaaaaggtatcaccgtgccgttc
gtcggccctgacaaccgcaagggcgccaagctggtcggcgacttcctagccaagcagatc
aagagcggcgacaaagtcgccatcatcgaaggcgtatcgaccaccttcaatgcgcaacaa
cgaaccctgggcttccaggatgcaatggctgcagccggcgccaaggttgtctcggtacaa
tccggtcaatgggaaatcgatccgggtaacaaggttgccgcctccatgctgaacgcgcat
cctgacatcaaggcgatcctggccggtaacgacaacatggcgctgggtgcggttgccgcc
gtcaaggcagccggcaaggccggtaaggtgctggtggtcggttacgacaacatcaatgcc
atcaagccgatgctcaaagacggacgcgtgctggcgactgccgaccagttcgcttcgcag
caagccgtgttcggcatcgaaacagtcctgaaagcactggccgacaagaaaccgcaaaac
agcctcggcggcaccgtggaaaccaaggtttctctggtgaccaaggacagcaaataa
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