Herbaspirillum sp. meg3: hmeg3_07605
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Entry
hmeg3_07605 CDS
T05024
Name
(GenBank) bacteriocin ABC transporter permease
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hmeg3_07605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_07605
02044 Secretion system [BR:
hee02044
]
hmeg3_07605
Transporters [BR:
hee02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
hmeg3_07605
Secretion system [BR:
hee02044
]
Type I secretion system
Adhesin protein transporter
hmeg3_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_membrane
SMC_N
AAA_29
MMR_HSR1
nSTAND1
RsgA_GTPase
AAA_22
AAA_16
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ASU38177
UniProt:
A0A223P7T3
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All DBs
Position
1680567..1682282
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AA seq
571 aa
AA seq
DB search
MNESDQIYVDQPQADLRSLRKDPVYLTLMRAYGSRFVEIIIAGVLINVFGLFMPIYSRLV
YDKVIGNHIPETLWALTLGMGLFIVLELILRVIRVYYVEQLAGRFDIEFDGASARRLLES
KVNAPVGVVLAKYRDLSNARDLLSSNYMLVLVDLPFLLLYLVAVGMIGGHLVWVMLVGGA
ILVSAQLLCKIPATDYGNAALKSGIGKTDKLASLVFGMETLKTSPLQYRLVKTFLSDAAD
NAVSQAKSRFWMNIGYASSAVGNTLISVGTLVVGVYLVEDNQLTVGALIASSLLISRSTS
MISSVATVLGRLEMFKRARAAFEDMFDDEDPQEVADVLRQDMSGLIQVINLTLHLDKNER
PALDNISLEIKPGEKVGIVGRSGSGKSSLLRALAGLHKVEPGKGQVLIDGVAVAAYATPV
RMRCIGYKPQEPFIFDGSLASNIFVGDRVDSKVYEAALAVSSVDDLIARGELRLDQILKA
PGNLSGGQRQMVALARTVAGMPAVMLLDEPTTGIDLATEARIIERLRAFSAQRTVVIATH
STALLKQMDRIIVLNDGKIVADGPSAQILQQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaagcgaccaaatctacgtcgatcagccgcaagccgatttgcgctccctgcgc
aaggatccggtgtatctgacgctgatgcgcgcttacggcagccgcttcgtcgagatcatc
atcgccggtgtgctgatcaacgtattcggcctgttcatgccgatctattcgcgtctggtg
tacgacaaggtgatcggcaaccacattccggaaaccttatgggcgctgacactgggcatg
ggtttgttcattgtgctggagctgatcctgcgcgtcatccgggtgtactacgtcgaacaa
ctggcaggacgtttcgacatcgagttcgatggcgcctcggcgcgccgtttactggagtcc
aaggtcaatgcgccggtcggcgtggtgctggccaagtatcgcgatctcagcaatgcgcgg
gacttgctgtcgtccaactacatgctggtgctggttgacctgccgtttttgctgctttat
ctggtggcagtcggaatgatcggaggtcatctggtgtgggtgatgctggtggggggcgca
atactggtgagcgcgcaactgctgtgcaaaatcccggcgaccgattacggcaacgccgcg
ttgaagtccggcattggcaagaccgacaagctggccagcctggtgttcggaatggaaacc
ctgaagacctcgcctttgcaatatcgcttggtcaagaccttcctgtcggatgctgcggac
aacgcagtaagccaggccaagagccgcttttggatgaacatcggctacgccagttcggcc
gtgggcaataccctgatttctgtcggtacgctggtggtcggcgtgtatctggtggaagac
aatcaactcaccgtcggcgcgctgattgccagctcgctgttgatcagccgctcgacctcg
atgatctcgtcggtggcaacggtgctgggacggctggagatgttcaagcgcgcacgtgct
gcattcgaagacatgttcgacgacgaagatccgcaagaagtcgccgacgtcttgcgacag
gacatgagcggcctgatccaggtcatcaacctgacgctgcatctggacaagaacgagcgc
ccggcgctggacaacatctcgctggagatcaagcccggtgaaaaggtgggcattgtcgga
cggtccggttccggcaagagcagtttgctgcgcgctctggccggcttgcacaaggtcgag
ccgggcaaggggcaggtgctgatcgacggcgttgccgtggctgcgtatgcaacgccggtg
cgcatgcgttgcattggttacaaaccgcaggagcctttcatttttgatggcagcctggct
tccaatatttttgtcggcgatcgtgtcgacagcaaagtgtatgaagcggcgttggcagtc
tccagcgtcgacgatctgatcgcgcgcggcgaactgcgtctggatcagatcttgaaggca
ccgggtaatctctccggcggccagcggcaaatggtagcgctggcgcgcaccgtggcgggc
atgccggccgtgatgttgctggatgaaccgaccaccggcatcgatctggcgaccgaggcg
cgcatcatcgagcggcttcgcgcgttttcggcgcagcgcacggtagtcatcgcaacgcac
agcacagcactgctcaaacagatggatcgcatcatcgttcttaacgacggcaagatcgtc
gccgacgggccgagtgcgcagattttgcagcaatag
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