Herbaspirillum sp. meg3: hmeg3_08160
Help
Entry
hmeg3_08160 CDS
T05024
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02020
Two-component system
hee02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
hmeg3_08160 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
hmeg3_08160 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hee03021
]
hmeg3_08160 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hee02035
]
hmeg3_08160 (fliA)
Transcription machinery [BR:
hee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
hmeg3_08160 (fliA)
Bacterial motility proteins [BR:
hee02035
]
Flagellar system
Flagellar assembly proteins
Stator
hmeg3_08160 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
SLATT_5
MarR
UPF0154
Motif
Other DBs
NCBI-ProteinID:
ASU38267
LinkDB
All DBs
Position
1800339..1801073
Genome browser
AA seq
244 aa
AA seq
DB search
MYNVNGKTDKNHLLQLHAPLVKKLAHQMKAKLPPSVEVDDLIQAGMIGLLDAVNRYEETH
GAQFETYAVQRIRGAMLDELRSSDWLPRSIRQSTRKIEDAIHVLMQQLGRPPQETEVAKQ
LKMSLNEYQEMLTECGGHQLIYYEDFHDAEGGHEHFLDRYQTSQNDDPLQNLINGGFREA
VIDSIKALPEREKILMGLYYEQEMNLKEIGAVMGVSESRVCQLHSQAIARMRSTLREQAW
TGVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgtcaatggcaagacggacaagaatcatttgctgcagctgcatgcgccgctc
gtaaagaagctggcgcatcagatgaaggcaaagcttcctccaagtgtggaagtggacgac
ttgattcaagcaggcatgataggcctgcttgacgctgtcaatcgctatgaagaaacgcat
ggcgcgcagtttgaaacctatgccgtgcagcgtatccgtggtgcgatgctcgacgagttg
cgcagcagcgactggctgccgcgcagcattcgccagagcacgcgcaagatcgaagacgca
attcatgttctgatgcagcagctgggacgaccgccgcaagaaacggaagtcgccaaacag
ctcaagatgagtctgaatgaatatcaggagatgctcaccgaatgcggcggccatcaactg
atctattacgaagactttcatgatgccgagggcggtcatgaacatttcctcgatcgttat
cagaccagccaaaatgacgatcctctgcaaaatctgatcaacggcggtttccgcgaagcc
gtgatcgattcgatcaaagctctccctgagcgtgaaaagatcctgatgggcctgtactac
gagcaggaaatgaacctgaaagaaatcggcgccgtcatgggcgtgtctgagtcgcgcgta
tgtcagttgcatagtcaggcgattgcccgcatgcgctcgaccttgagggagcaagcgtgg
actggagtagcttag
DBGET
integrated database retrieval system
