Herbaspirillum sp. meg3: hmeg3_08425
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Entry
hmeg3_08425 CDS
T05024
Name
(GenBank) xylanase
KO
K13014
undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00541
Biosynthesis of various nucleotide sugars
hee01100
Metabolic pathways
hee01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
hmeg3_08425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
hmeg3_08425
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Motif
Pfam:
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
ASU38317
UniProt:
A0A223P876
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Position
complement(1850457..1851401)
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AA seq
314 aa
AA seq
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MPQITLKIDADTYRGTREGVPNLVQQLLRHGANATFLFSLGPDHTGWALKQVFRPGFFSK
VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCGNYMRAVRDAGFECGIHTWDHRVWQDNVRI
RDAAWTQEVMQRSYARFHDIFGHTPVTHGAAGWQMNDYAFAQLDEFGIAYSSDGRAVLKE
DGSLEDASAGPHRLSVHGKASSCVQLPTTLPTLDELLGRTINGVVMDTSNVAAMLLRLTE
RQTRDHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGDYYQTVKDDVLPILPIAWG
ELPGRSGDMILQAA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcagatcactctcaaaattgacgccgacacctatcgcgggacacgcgaaggcgtc
ccaaatctggttcagcaactgctgcgtcacggcgccaacgcgaccttcctgttttctctc
ggccccgaccacaccggatgggcgttgaaacaagtattccgccccggcttcttcagcaag
gtatcgcgcacgtcagtggtcgaacattacggcatcaagacgctgatgtacggcaccctg
ctgccggcaccggatatcggcaagacctgcggaaattacatgcgtgcggtacgcgatgcc
ggcttcgaatgcggcatccacacctgggaccaccgcgtctggcaagacaatgtccgcatc
cgcgacgcagcgtggacgcaggaagtcatgcagcgctcgtatgcacgtttccatgacatc
ttcggccacacgcctgttacgcatggggcagctggctggcagatgaacgattatgcgttc
gcacagttggacgaattcggcatcgcctactcgtccgacggccgcgccgtgttgaaggaa
gacggttcgctggaagatgcctcggccggtccgcatcgcttgtccgtgcacggcaaagcc
tcgtcctgcgtgcaactgccgaccaccttgccaacactggacgaactgctcggacgcacc
attaacggcgttgtcatggatacgtcaaatgtcgcagctatgctgttacgactgaccgag
cggcaaacgcgggaccacgtctttacactgcacgccgaacttgaaggacagaaacttgcc
cccatcttcgagcaattgctgcttggctggcgcgcacagggttacgatctggtctccatg
ggcgactactaccagaccgtcaaagacgatgtcttgccgattcttcccatcgcctggggc
gaattgccgggacgctccggagacatgatcctgcaggcggcatga
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