Herbaspirillum sp. meg3: hmeg3_08840
Help
Entry
hmeg3_08840 CDS
T05024
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hee
Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hee03009
]
hmeg3_08840
Enzymes [BR:
hee01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
hmeg3_08840
Ribosome biogenesis [BR:
hee03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
hmeg3_08840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Methyltransf_31
RrnaAD
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
TRAM
Methyltransf_32
Methyltrans_SAM
PCMT
UPF0020
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_11
PrmA
Motif
Other DBs
NCBI-ProteinID:
ASU38391
UniProt:
A0A223P934
LinkDB
All DBs
Position
1942676..1944034
Genome browser
AA seq
452 aa
AA seq
DB search
MQQNIIDIKALDMDGRGVGHLANEDGTQGKVVFVEGALPGEQVSFHSYRKKPKWEAATMT
ALHRESSLRVKPQCDYFGICGGCAMQHLEPSAQVAMKQRVLEDNLWHLSKLKAETMLRPI
YGPTWGYRYRARISVKNVVKKGTVLVGFHEKKSPFVSDMKTCEILPPHVSAMLVPLRHLI
GSLTIIDRLPQIELAIGEGDDGQKTTVMVLRVMEPPSADDEVKLKAFADEHKVEWWLQPK
GPDTAYPYYPPQSNLHYTLPEFGIRMPFKPTDFTQVNHQINRVLVARALRLLDAQPEDRV
ADLFCGLGNFTLPIATMAKEVVGIEGSTALTERAAENAKVNNVAEKTSFYCRNLFEATTE
DFIALGKFDRMLIDPPREGALEVCKAIAGLSEQHAHLKPKRIVYVSCNPATLARDSGELV
NGGGYRLKLAGVVNMFPHTAHVESMAVFDLDE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaacattatcgatatcaaagccctcgacatggacgggcgcggcgtcggccat
ctggccaacgaagatggtacccagggcaaagtcgtgttcgtcgaaggcgcgttgccgggg
gagcaagtcagtttccattcctaccgcaaaaaaccgaagtgggaggccgccacgatgacg
gccttgcatcgtgaatcgtcattgcgcgtcaagccgcaatgcgactatttcggcatttgc
ggcggctgcgccatgcagcatctggagccttccgcacaagtcgccatgaagcagcgcgtg
ctggaagacaatctctggcatctcagcaagctcaaggctgaaaccatgttgcgtccgatt
tacgggccaacctggggctatcgttatcgcgcccggatttcagtgaagaatgtggtcaaa
aaaggcacagtgctggttggttttcatgagaagaaatcgccctttgtgagcgacatgaag
acttgcgaaatcctgccgccgcatgtttctgcgatgctggtgccgttgcgtcatctgatt
ggatctttgaccatcattgatcgtctgccgcagattgaactggcgatcggtgagggtgat
gacggacagaaaacgacggtgatggtattgcgcgtgatggagccacctagtgctgacgac
gaagtcaaattgaaagctttcgcggacgagcacaaggtcgaatggtggttgcagcccaaa
ggccccgataccgcctacccgtactatccgccgcagtcgaatctgcactatacgctgcct
gagttcggtattcgcatgcctttcaagccgaccgatttcacgcaagtcaatcatcagatc
aatcgcgtcttggtcgcgcgagccttgcgtttgctggatgcgcagccggaagatcgagtg
gccgacttgttctgcggtctgggtaacttcactttgccgattgccacgatggcaaaagag
gtggttggcattgaagggagcaccgcgctgacggagcgcgcagcggaaaatgccaaggtc
aacaatgtcgccgagaagacgtcgttctattgccgcaacttgttcgaagcgacgacagag
gatttcattgcgctgggcaagttcgatcggatgctgatcgatccgccgcgtgaaggtgcg
ctggaagtctgtaaagccattgctggtctgagtgagcagcatgcccatctgaagcccaag
cgcatcgtgtatgtgtcatgcaatccagcgacgctggcgcgtgactccggtgagttggtg
aatggcggcggctaccgtttgaaactggccggcgtggtcaacatgttcccgcatactgca
cacgtggaatcgatggcggtttttgatttggatgagtga
DBGET
integrated database retrieval system
