Herbaspirillum sp. meg3: hmeg3_09165
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Entry
hmeg3_09165 CDS
T05024
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
hmeg3_09165 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hee01007
]
hmeg3_09165 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hee03016
]
hmeg3_09165 (lysS)
Enzymes [BR:
hee01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
hmeg3_09165 (lysS)
Amino acid related enzymes [BR:
hee01007
]
Aminoacyl-tRNA synthetase
Class II (A)
hmeg3_09165 (lysS)
Transfer RNA biogenesis [BR:
hee03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
hmeg3_09165 (lysS)
Prokaryotic type
Other AARSs
hmeg3_09165 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASU38450
UniProt:
A0A223P8U4
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All DBs
Position
complement(2018268..2019824)
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AA seq
518 aa
AA seq
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MTTQNDNAAQPAQQQPPVDENTIIAERRSKLNAIREQGVAFPNDFRPEHKAAELHAQYGE
LDNEALEANPVNVSIAGRMMLKRVMGKASFATLQDSSGPRAEGRMQLYITNDVTGPEAHG
AFKHYDLGDILGAEGTLFKTKTGELSVKVTGLRLITKSLRPLPDKFHGLSDQETKYRQRY
VDLIMSEETRRTFKARTAAMSSIRRFMEKNDFMEVETPMLHTIPGGAAAKPFITHHNALD
MQMFLRIAPELYLKRLVVGGFNRVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLM
TFTEQVIRQAAIDAHGTATLTYQGRELDLAKPFQRLTITGAIKKYAPEYTDEQLNDIDFL
RTALKKFGVKTDQAPLAKAGIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDTV
AGITERFELFITGREIANGFSELNDAEDQAARFQAQVAAKDAGDEEAMYYDADYIRALEY
GMPPAGGCGIGIDRLMMLITDSPNIRDVILFPHLRRED
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacaaaacgacaacgccgctcagccagcgcaacaacagccgccagtagatgaa
aacaccatcatcgccgagcgccgctccaagctgaatgcgatccgcgagcaaggcgtcgcc
ttccccaacgacttccgccctgaacacaaggccgccgaattgcacgcgcaatacggcgag
ctggacaacgaagcgctggaagccaatccggtcaacgtctccatcgccggccgcatgatg
ttgaagcgcgtgatgggcaaggcatcgttcgcgacactgcaagactcgtccggcccccgc
gccgaaggccgcatgcagctctacatcaccaacgacgtgacgggcccggaagcgcacggc
gcattcaagcactacgacctgggtgacatccttggggccgaaggcacgctgttcaagacc
aagaccggcgagctgtcggtcaaggtgaccggcctgcgtctgatcaccaagtcgctgcgc
ccgttgccggacaagttccacggtctgtcggatcaggaaaccaagtaccgtcagcgttac
gtcgacctgatcatgagcgaagaaacgcgccgcaccttcaaggcccgcacggctgcgatg
tcgtcgatccgccgcttcatggaaaagaacgacttcatggaagtcgaaacgccgatgctc
cacaccatccccggcggcgcagcggccaagcctttcatcacgcatcacaatgcactggac
atgcagatgttcctgcgtatcgcgcctgagctgtacctgaagcgcctggtggtcggcggc
ttcaaccgcgtgtttgaagtcaaccgcaacttccgtaacgaaggtgtttcgccgcgtcac
aatcctgaattcacgatgatggaattctatgcggcctacgtcgattaccaatggctgatg
accttcaccgaacaagtgattcgtcaggccgcgatcgatgcacatggcactgccacgctg
acgtaccaaggccgcgagctggatctggcgaagccgttccagcgcctgaccatcaccggt
gcgatcaagaagtacgcaccggaatataccgatgaacaactgaacgacatcgacttcctg
cgcaccgcgctgaagaagttcggcgtcaagaccgaccaggctcctcttgcaaaggccggc
atcggtgcgctgcaactggcactgtttgaagaaacagccgaatcgcaattgtgggaaccg
acctacatcatcgattacccggttgaagtgtcgccgctggcacgtgcctctgatacggtt
gcaggtatcaccgagcgcttcgaactattcatcacgggccgtgaaatcgccaacggcttc
tctgagttgaacgatgccgaagaccaggctgcacgcttccaggcgcaagtcgctgcaaaa
gatgcgggcgacgaagaagccatgtattacgacgccgattacatccgtgcgcttgaatac
ggcatgccaccagctggtggttgcggcatcggtatcgaccgcctgatgatgttgatcacc
gactcgccaaacatccgtgacgtgattctgttccctcacctgcgtcgcgaggactaa
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